Gene EcHS_A1128 details

Gene Information

• Locus tag: EcHS_A1128
• Symbol: rutR
• ID: 5594519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1136541
• End bp: 1137179
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640920291
• Product: transcriptional regulator RutR
• Protein accession: YP_001457855
• Protein GI: 157160537
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator
• TIGRFAM ID: [TIGR03613] pyrimidine utilization regulatory protein R

Plasmid Coverage information

• Num covering plasmid clones: 64
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAAG GCGCAGTGAA AACAACGGGT AAACGTTCGC GCGTAGTAAG CGCGAAGAAA 
AAAGCGATTC TTAGCGCAGC ACTGGACACT TTTTCACAAT TCGGTTTTCA CGGCACAAGG 
CTGGAGCAGA TCGCAGAGTT GGCGGGTGTT TCAAAAACCA ATCTGCTGTA TTACTTTCCG 
TCAAAAGAGG CGCTGTATAT TGCCGTGCTG CGGCAGATTC TCGATATCTG GCTGGCACCG 
TTAAAAGCGT TTCGAGAAGA TTTCGCCCCG CTGGCGGCGA TCAAAGAGTA CATCCGTCTG 
AAGCTGGAAG TCTCACGCGA TTATCCGCAG GCTTCGCGCC TGTTCTGTAT GGAGATGCTG 
GCAGGCGCGC CGCTGTTAAT GGATGAACTG ACGGGCGATT TGAAGGCATT AATTGATGAG 
AAATCGGCGC TGATTGCCGG TTGGGTCAAA AGCGGCAAAC TCGCGCCGAT TGATCCGCAG 
CATTTGATTT TTATGATTTG GGCTTCCACT CAACATTACG CCGATTTCGC CCCTCAGGTG 
GAGGCGGTGA CAGGCGCGAC GTTGCGCGAT GAGGTATTTT TCAATCAAAC GGTTGAAAAC 
GTGCAGCGGA TTATTATTGA GGGGATTCGA CCACGTTAA 

 

Protein sequence

MTQGAVKTTG KRSRVVSAKK KAILSAALDT FSQFGFHGTR LEQIAELAGV SKTNLLYYFP 
SKEALYIAVL RQILDIWLAP LKAFREDFAP LAAIKEYIRL KLEVSRDYPQ ASRLFCMEML 
AGAPLLMDEL TGDLKALIDE KSALIAGWVK SGKLAPIDPQ HLIFMIWAST QHYADFAPQV 
EAVTGATLRD EVFFNQTVEN VQRIIIEGIR PR