Gene EcHS_A1054 details

Gene Information

• Locus tag: EcHS_A1054
• Symbol: pyrD
• ID: 5592134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1066382
• End bp: 1067392
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640920219
• Product: dihydroorotate dehydrogenase 2
• Protein accession: YP_001457784
• Protein GI: 157160466
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0167] Dihydroorotate dehydrogenase
• TIGRFAM ID: [TIGR01036] dihydroorotate dehydrogenase, subfamily 2

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000000000778438
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACTACC CCTTCGTTCG TAAAGCCCTT TTCCAGCTCG ATCCAGAGCG CGCTCATGAG 
TTTACTTTTC AGCAATTACG CCGTATTACA GGAACGCCGT TTGAAGCACT GGTGCGGCAG 
AAAGTGCCTG CGAAACCTGT TAACTGCATG GGCCTGACGT TTAAAAATCC GCTTGGTCTG 
GCAGCCGGTC TTGATAAAGA CGGGGAGTGC ATTGACGCGT TAGGCGCGAT GGGATTTGGA 
TCGATCGAGA TCGGTACCGT CACGCCACGT CCACAGCCAG GTAATGACAA GCCGCGTCTC 
TTTCGTCTGG TAGATGCCGA AGGTTTGATC AACCGTATGG GCTTTAATAA TCTTGGCGTT 
GATAACCTCG TAGAGAACGT AAAAAAGGCC CATTATGACG GCGTCCTGGG TATTAACATC 
GGCAAAAATA AAGATACGCC AGTGGAGCAG GGCAAAGATG ACTATCTGAT TTGTATGGAA 
AAAATCTATG CCTATGCGGG ATATATCGCC ATCAATATTT CATCGCCGAA TACCCCAGGA 
TTACGCACGC TGCAATATGG TGAAGCGCTG GATGATCTCT TAACCGCGAT TAAAAATAAG 
CAAAATGATT TGCAAGCGAT GCACCATAAA TATGTGCCGA TCGCAGTGAA GATCGCGCCG 
GATCTTTCTG AAGAAGAATT GATCCAGGTT GCCGATAGTT TAGTTCGCCA TAATATTGAT 
GGCGTTATTG CAACCAATAC CACACTCGAT CGTTCTCTTG TTCAGGGAAT GAAAAATTGC 
GATCAAACCG GTGGCTTAAG TGGTCGTCCG CTTCAGTTAA AAAGCACCGA AATTATTCGC 
CGCTTGTCAC TGGAATTAAA CGGTCGCTTA CCGATCATCG GTGTTGGCGG CATCGACTCG 
GTTATCGCTG CGCGTGAAAA GATTGCTGCG GGTGCCTCAC TGGTGCAAAT TTATTCTGGT 
TTTATTTTTA AAGGTCCGCC GCTGATTAAA GAAATCGTTA CCCATATCTA A 

 

Protein sequence

MYYPFVRKAL FQLDPERAHE FTFQQLRRIT GTPFEALVRQ KVPAKPVNCM GLTFKNPLGL 
AAGLDKDGEC IDALGAMGFG SIEIGTVTPR PQPGNDKPRL FRLVDAEGLI NRMGFNNLGV 
DNLVENVKKA HYDGVLGINI GKNKDTPVEQ GKDDYLICME KIYAYAGYIA INISSPNTPG 
LRTLQYGEAL DDLLTAIKNK QNDLQAMHHK YVPIAVKIAP DLSEEELIQV ADSLVRHNID 
GVIATNTTLD RSLVQGMKNC DQTGGLSGRP LQLKSTEIIR RLSLELNGRL PIIGVGGIDS 
VIAAREKIAA GASLVQIYSG FIFKGPPLIK EIVTHI