Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0975 |
Symbol | poxB |
ID | 5593155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 969566 |
End bp | 971284 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640920146 |
Product | pyruvate dehydrogenase |
Protein accession | YP_001457712 |
Protein GI | 157160394 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA CGGTTGCAGC TTATATCGCC AAAACACTCG AATCGGCAGG GGTGAAACGC ATCTGGGGAG TCACAGGCGA CTCTCTGAAC GGTCTTAGTG ACAGTCTTAA TCGCATGGGC ACCATCGAGT GGATGTCCAC CCGCCACGAA GAAGTGGCGG CCTTTGCCGC TGGCGCTGAA GCACAACTTA GCGGAGAACT GGCGGTCTGT GCCGGATCGT GCGGCCCCGG CAACCTGCAC TTAATCAACG GCCTGTTCGA TTGCCACCGC AATCACGTTC CGGTACTGGC GATTGCCGCT CATATTCCCT CCAGCGAAAT TGGCAGCGGC TATTTCCAGG AAACCCACCC ACAAGAGCTA TTCCGCGAAT GTAGTCACTA TTGCGAGCTG GTTTCCAGCC CGGAGCAGAT CCCACAAGTG CTGGCAATTG CTATGCGCAA AGCAGTGCTT AACCGTGGCG TTTCCGTTGT TGTGTTACCG GGTGACGTGG CGTTAAAACC TGCGCCAGAA GGAGCAACTA CCCACTGGTA TCATGCGCCA CAGCCAGTTG TGACGCCGGA AGAAGAAGAG TTACGCAAAC TGGCGCAACT GCTGCGTTAT TCCAGCAATA TCGCCCTGAT GTGTGGCAGC GGCTGCGCGG GGGCGCATAA AGAGTTAGTT GAGTTTGCCG GGAAAATTAA AGCACCTATT GTTCATGCCC TGCGCGGTAA AGAACATGTC GAATACGATA ATCCGTATGA TGTTGGAATG ACCGGGTTAA TCGGCTTCTC GTCAGGTTTT CACACTATGA TGAATGCCGA TACGTTAGTG CTGCTCGGCA CGCAATTTCC CTACCGCGCC TTCTACCCGA CCGATGCCAA AATCATTCAG ATTGATATCA ATCCAGCCAG CATCGGCGCG CATAGCAAGG TAGATATGGC GCTGGTCGGC GATATCAAAT CAACCCTGCG TGCATTGCTG CCACTGGTGG AAGAAAAAGC CGATCGCAAA TTTCTGGATA AAGCGCTGGA AGATTACCGC GATGCCCGCA AAGGGCTGGA CGATTTAGCT AAACCGAGCG AGAAAGCCAT TCACCCGCAA TATCTGGCGC AGCAAATTAG TCATTTTGCC GCCGATGACG CAATCTTTAC CTGTGACGTC GGCACGCCAA CAGTATGGGC AGCGCGTTAT CTAAAAATGA ACGGCAAGCG TCGCCTGTTA GGTTCGTTTA ACCACGGTTC GATGGCTAAC GCCATGCCGC AGGCGCTGGG TGCGCAGGCG ACAGAGCCAG AACGTCAGGT GGTCGCCATG TGCGGCGATG GCGGTTTTAG CATGTTGATG GGCGATTTCC TCTCAGTAGT GCAGATGAAA CTGCCAGTGA AAATTGTCGT CTTTAACAAC AGCGTGCTGG GCTTTGTGGC GATGGAGATG AAAGCTGGTG GCTATTTGAC TGACGGCACC GAACTACACG ACACAAACTT TGCCCGCATT GCCGAAGCGT GCGGCATTAC GGGTATCCGT GTAGAAAAAG CGTCTGAAGT TGATGAAGCC CTGCAACGCG CCTTCTCCAT CGACGGTCCG GTGCTGGTGG ATGTGGTGGT CGCCAAAGAA GAGTTAGCCA TTCCACCGCA GATCAAACTC GAACAGGCCA AAGGATTTAG CTTGTATATG TTGCGCGCAA TCATCAGCGG ACGCGGCGAT GAAGTGATCG AACTGGCGAA AACGAACTGG CTAAGGTAA
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Protein sequence | MKQTVAAYIA KTLESAGVKR IWGVTGDSLN GLSDSLNRMG TIEWMSTRHE EVAAFAAGAE AQLSGELAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA HIPSSEIGSG YFQETHPQEL FRECSHYCEL VSSPEQIPQV LAIAMRKAVL NRGVSVVVLP GDVALKPAPE GATTHWYHAP QPVVTPEEEE LRKLAQLLRY SSNIALMCGS GCAGAHKELV EFAGKIKAPI VHALRGKEHV EYDNPYDVGM TGLIGFSSGF HTMMNADTLV LLGTQFPYRA FYPTDAKIIQ IDINPASIGA HSKVDMALVG DIKSTLRALL PLVEEKADRK FLDKALEDYR DARKGLDDLA KPSEKAIHPQ YLAQQISHFA ADDAIFTCDV GTPTVWAARY LKMNGKRRLL GSFNHGSMAN AMPQALGAQA TEPERQVVAM CGDGGFSMLM GDFLSVVQMK LPVKIVVFNN SVLGFVAMEM KAGGYLTDGT ELHDTNFARI AEACGITGIR VEKASEVDEA LQRAFSIDGP VLVDVVVAKE ELAIPPQIKL EQAKGFSLYM LRAIISGRGD EVIELAKTNW LR
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