| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0908 |
|---|
| Symbol | |
|---|
| ID | 5594189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 916259 |
|---|
| End bp | 916795 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640920078 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001457645 |
|---|
| Protein GI | 157160327 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.0778822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCG CTAACGATCC GCAACGGCGA GAAAAAATTA TCCAGGCCAC GCTGGAGGCG
GTGAAACTTT ACGGAATACA TGCTGTTACG CACCGCAAAA TTGCTACCCT TGCCGGGGTA
CCGTTGGGAT CGATGACCTA CTATTTTTCA GGAATTGATG AGTTGTTGCT GGAGGCGTTC
AGCAGTTTTA CTGAGATTAT GTCCCGGCAA TATCAGGCAT TTTTTAGCGA TGTTAGTGAT
GCTCAAGGCG CATGCCAGGC TATCACCGAT ATGATCTACA GCTCACAGGT TGCAAAGCCG
GATAATATGG AGCTGATGTA CCAGCTCTAC GCGCTGGCTA GCCGAAAACC GCTATTAAAA
ACGGTAATGC AAAACTGGAT GCAGCGCAGT CAGCAAACGC TCGAACAATG GTTTGAACCC
GGAACCGCCC GCGCGCTTGA TGCGTTTATT GAGGGGATGA CGCTGCATTT TGTCACCGAC
CGTAAGCCGC TATCGCGCGA GGAGATTTTG AGGATGGTTG AGAGGGTTGC AGGGTAG
|
|---|
| Protein sequence | MRRANDPQRR EKIIQATLEA VKLYGIHAVT HRKIATLAGV PLGSMTYYFS GIDELLLEAF
SSFTEIMSRQ YQAFFSDVSD AQGACQAITD MIYSSQVAKP DNMELMYQLY ALASRKPLLK
TVMQNWMQRS QQTLEQWFEP GTARALDAFI EGMTLHFVTD RKPLSREEIL RMVERVAG
|
|---|
| |