Gene EcHS_A0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0842 
Symbol 
ID5593182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp848146 
End bp849102 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content52% 
IMG OID640920014 
Producthypothetical protein 
Protein accessionYP_001457581 
Protein GI157160263 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT CACACCCGCG CTGGCGCTTA GCAAAGAAGA TCCTCACCTG GCTGTTTTTT 
ATCGCGGTGA TTGTGTTGCT GGTGGTCTAC GCCAAAAAGG TGGACTGGGA AGAGGTCTGG
AAGGTCATCC GTGACTACAA TCGCGTTGCG CTGCTCAGTG CGGTCGGGCT GGTGGTCGTC
AGTTATCTGA TTTACGGCTG CTATGACCTG CTCGCCCGCT TTTACTGCGG TCACAAACTG
GCGAAGCGCC AGGTGATGCT GGTGTCGTTT ATCTGCTACG CCTTCAACCT GACACTCAGT
ACCTGGGTCG GCGGCATTGG TATGCGCTAT CGTTTGTACT CTCGTCTGGG GTTGCCCGGT
AGCACTATTA CGCGGATTTT CTCGCTCAGT ATCACCACCA ACTGGCTGGG CTATATTTTG
CTGGCGGGGA TTATCTTTAC CGCAGGCGTG GTGGAGTTGC CGGATCACTG GTATGTCGAT
CAAACTACGC TGCGTATTCT CGGCATTGGC TTACTGATGA TTATCGCGGT TTATTTGTGG
TTTTGCGCTT TCGCGAAGCA CCGCCATATG ACCATTAAAG GGCAAAAGCT GGTACTGCCT
TCATGGAAAT TCGCCCTCGC CCAGATGCTG ATTTCCAGCG TTAACTGGAT GGTAATGGGG
GCGATTATCT GGCTGTTACT TGGTCAAAGC GTTAACTATT TCTTTGTACT GGGCGTGTTG
CTGGTTAGTA GTATTGCAGG CGTCATCGTG CATATTCCGG CGGGAATTGG TGTGCTGGAA
GCGGTGTTTA TCGCGCTACT GGCTGGGGAG CATATCACCA AAGGCACAAT TATCGCCGCC
CTGCTCGCTT ACCGTGTGCT GTATTACTTT ATCCCACTGC TGCTGGCGCT GATCTGTTAC
CTGTTGCTGG AAAGCCAGGC GAAAAAGCTA CGAGCGAAAA ATGAAGCGGC GATGTGA
 
Protein sequence
MSKSHPRWRL AKKILTWLFF IAVIVLLVVY AKKVDWEEVW KVIRDYNRVA LLSAVGLVVV 
SYLIYGCYDL LARFYCGHKL AKRQVMLVSF ICYAFNLTLS TWVGGIGMRY RLYSRLGLPG
STITRIFSLS ITTNWLGYIL LAGIIFTAGV VELPDHWYVD QTTLRILGIG LLMIIAVYLW
FCAFAKHRHM TIKGQKLVLP SWKFALAQML ISSVNWMVMG AIIWLLLGQS VNYFFVLGVL
LVSSIAGVIV HIPAGIGVLE AVFIALLAGE HITKGTIIAA LLAYRVLYYF IPLLLALICY
LLLESQAKKL RAKNEAAM