| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0742 |
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| Symbol | kdpD |
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| ID | 5592972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 747810 |
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| End bp | 750494 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640919919 |
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| Product | sensor protein KdpD |
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| Protein accession | YP_001457493 |
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| Protein GI | 157160175 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.204063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG AACCCTTACG TCCCGACCCC GATCGTCTGC TGGAACAAAC TGCCGCGCCG
CATCGGGGGA AGCTGAAAGT TTTCTTCGGT GCCTGTGCAG GCGTCGGGAA GACCTGGGCG
ATGCTGGCAG AAGCACAGCG ACTGCGGACG CAAGGGCTGG ATATTGTGGT TGGCGTGGTA
GAAACCCACG GGCGGAAAGA TACCGCCGCC ATGCTGGAAG AGCTGGCTGT TCTGCCGCCA
AAACGCCTGG CGTACCGTGG GCGGCATATC AGCGAGTTTG ATCTCGATGC CGCCCTCGCC
CGCCGTCCGG CGCTGATCTT AATGGACGAA CTGGCGCACA GTAATGCGCC TGGTTCTCGT
CATCCCAAAC GCTGGCAGGA TATTGAAGAG CTGCTGGAAG CAGGCATTGA TGTTTTTACT
ACCGTCAACG TTCAGCATCT GGAAAGTCTG AATGATGTGG TCAGCGGCGT CACCGGAATT
CAGGTACGGG AAACCGTGCC CGATCCTTTT TTCGATGCCG CCGACGACGT GGTGCTGGTG
GACTTGCCCC CGGACGATCT GCGCCAGCGG CTGAAAGAAG GCAAAGTCTA TATTGCCGGG
CAGGCGGAGC GCGCCATTGA ACATTTTTTC CGCAAAGGCA ATCTGATCGC CCTGCGCGAA
CTGGCACTGC GCCGTACTGC CGATCGCGTT GATGAGCAAA TGCGCGCCTG GCGGGGGCAT
CCTGGCGAAG AGAAAGTCTG GCACACGCGC GACGCGATCC TTTTATGCAT CGGCCATAAC
ACCGGCAGCG AAAAACTGGT CCGCGCGGCG GCGCGGCTGG CGTCACGGCT GGGGAGCGTC
TGGCACGCGG TGTATGTTGA AACCCCTGCC CTGCATCGCT TACCGGAGAA AAAACGTCGG
GCAATTCTCA GCGCCTTACG TCTGGCGCAG GAGCTGGGCG CGGAGACGGC AACACTTTCT
GATCCAGCGG AAGAGAAAGC GGTAGTGCGT TATGCCCGTG AACATAATCT CGGCAAGATT
ATTCTCGGTC GCCCAGCCTC GCGCCGCTGG TGGCGTCGGG AAACGTTTGC TGACCGACTG
GCGCGCATCG CCCCCGATCT CGATCAGGTG CTGGTCGCGC TTGATGAACC ACCCGCCCGC
ACGATTAACA ACGCGCCGGA TAGCCGCTCT TTTAAAGACA AGTGGCGGGT ACAGATTCAG
GGATGCGTGG TTGCCGCCGC GTTATGCGCC GTTATCACCT TAATTGCCAT GCAGTGGCTG
ATGGCGTTTG ATGCCGCCAA CCTGGTGATG CTGTATCTGC TTGGCGTGGT GGTGGTGGCG
CTATTTTATG GACGCTGGCC TTCGGTGGTT GCTACCGTCA TTAATGTGGT GAGTTTCGAT
CTCTTTTTTA TCGCCCCACG CGGCACGCTC GCCGTCTCTG ATGTGCAATA TCTGCTGACC
TTCGCGGTGA TGTTAACCGT CGGGCTGGTG ATCGGGAACC TTACTGCGGG TGTGCGTTAT
CAGGCGCGGG TAGCCCGTTA CCGCGAGCAA CGCACACGGC ACTTATATGA AATGTCGAAA
GCTCTGGCGG TGGGCCGCAG TCCGCAGGAC ATCGCCGCCA CCAGCGAACA ATTTATTGCC
TCCACGTTTC ATGCCCGCAG TCAGGTGTTG TTGCCCGATG ACAACGGTAA ATTGCAGCCG
TTAACACATC CGCAAGGAAT GACGCCGTGG GACGATGCCA TCGCGCAGTG GAGTTTTGAT
AAAGGCCTGC CTGCGGGTGC GGGCACCGAC ACGTTACCCG GTGTACCGTA CCAAATTTTG
CCGTTAAAAA GCGGCGAGAA AACCTACGGA CTGGTGGTGG TGGAACCGGG GAATCTGCGT
CAGTTGATGA TTCCGGAGCA GCAGCGCCTG CTGGAGACGT TTACGCTGTT AGTCGCCAAT
GCGCTTGAGC GGCTGACGCT AACCGCCAGC GAAGAACAGG CGCGGATGGC AAGCGAACGT
GAACAGATCC GCAACGCCCT GCTGGCGGCG CTTTCGCATG ATTTACGCAC TCCGCTCACG
GTGTTGTTCG GTCAGGCAGA AATCTTAACG CTCGATCTGG CAAGCGAAGG ATCGCCCCAC
GCCCGCCAGG CCAGCGAGAT CCGTCAGCAC GTGCTGAACA CTACCCGACT GGTGAATAAT
CTACTGGATA TGGCGCGAAT TCAGTCCGGC GGCTTTAATT TGAAAAAAGA GTGGTTAACG
CTGGAAGAAG TGGTCGGCAG CGCGCTGCAA ATGCTGGAAC CGGGTTTATC GTCGCCCATC
AATCTTTCTC TGCCAGAACC GCTGACCTTA ATCCACGTTG ACGGGCCACT CTTTGAACGG
GTGCTGATTA ATCTGCTGGA GAACGCGGTG AAATATGCGG GTGCGCAGGC CGAAATTGGT
ATCGATGCCC ACGTTGAGGG CGAAAATCTA CAACTGGATG TCTGGGATAA CGGCCCCGGT
CTTCCGCCAG GCCAGGAGCA GACGATATTT GATAAGTTTG CTCGCGGGAA TAAAGAGTCG
GCAGTACCGG GGGTAGGGCT TGGACTGGCA ATTTGTCGGG CGATAGTGGA TGTACACGGG
GGCACTATTA CCGCGTTCAA CCGACCGGAA GGTGGTGCCT GTTTTCGTGT TACACTTCCC
CAGCAAACTG CCCCTGAACT TGAAGAATTT CATGAGGATA TGTGA
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| Protein sequence | MNNEPLRPDP DRLLEQTAAP HRGKLKVFFG ACAGVGKTWA MLAEAQRLRT QGLDIVVGVV
ETHGRKDTAA MLEELAVLPP KRLAYRGRHI SEFDLDAALA RRPALILMDE LAHSNAPGSR
HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADDVVLV
DLPPDDLRQR LKEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DEQMRAWRGH
PGEEKVWHTR DAILLCIGHN TGSEKLVRAA ARLASRLGSV WHAVYVETPA LHRLPEKKRR
AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI ILGRPASRRW WRRETFADRL
ARIAPDLDQV LVALDEPPAR TINNAPDSRS FKDKWRVQIQ GCVVAAALCA VITLIAMQWL
MAFDAANLVM LYLLGVVVVA LFYGRWPSVV ATVINVVSFD LFFIAPRGTL AVSDVQYLLT
FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSPQD IAATSEQFIA
STFHARSQVL LPDDNGKLQP LTHPQGMTPW DDAIAQWSFD KGLPAGAGTD TLPGVPYQIL
PLKSGEKTYG LVVVEPGNLR QLMIPEQQRL LETFTLLVAN ALERLTLTAS EEQARMASER
EQIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASEGSPH ARQASEIRQH VLNTTRLVNN
LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLSSPI NLSLPEPLTL IHVDGPLFER
VLINLLENAV KYAGAQAEIG IDAHVEGENL QLDVWDNGPG LPPGQEQTIF DKFARGNKES
AVPGVGLGLA ICRAIVDVHG GTITAFNRPE GGACFRVTLP QQTAPELEEF HEDM
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