Gene EcHS_A0682 details

Gene Information

• Locus tag: EcHS_A0682
• Symbol: lipB
• ID: 5594604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 697720
• End bp: 698361
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640919862
• Product: lipoate-protein ligase B
• Protein accession: YP_001457444
• Protein GI: 157160126
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000000000000064187
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTATCAGG ATAAAATTCT TGTCCGCCAG CTCGGTCTTC AGCCTTACGA GCCAATCTCC 
CAGGCTATGC ATGAATTCAC CGATACCCGC GATGATAGTA CCCTTGATGA AATCTGGCTG 
GTCGAGCACT ATCCGGTATT CACCCAAGGT CAGGCAGGAA AAGCGGAGCA CATTTTAATG 
CCGGGTGATA TTCCGGTGAT CCAGAGCGAT CGCGGTGGGC AGGTGACTTA TCACGGGCCG 
GGGCAACAGG TGATGTATGT GTTGCTTAAC CTGAAACGCC GTAAACTCGG TGTGCGTGAA 
CTGGTGACCT TGCTTGAGCA AACAGTGGTG AATACCCTGG CTGAACTGGG TATAGAAGCG 
CATCCTCGGG CTGACGCGCC AGGTGTCTAT GTTGGGGAAA AGAAAATTTG CTCACTGGGT 
TTACGTATTC GACGCGGTTG TTCATTCCAC GGTCTGGCAT TAAACGTCAA TATGGATCTT 
TCACCATTTT TACGTATTAA TCCTTGTGGG TATGCCGGAA TGGAAATGGC TAAAATATCA 
CAATGGAAAC CCGAAGCGAC GACTAATAAT ATTGCTCCAC GTTTACTGGA AAATATTTTA 
GCGCTACTAA ACAATCCGGA CTTCGAATAT ATTACCGCTT AA 

 

Protein sequence

MYQDKILVRQ LGLQPYEPIS QAMHEFTDTR DDSTLDEIWL VEHYPVFTQG QAGKAEHILM 
PGDIPVIQSD RGGQVTYHGP GQQVMYVLLN LKRRKLGVRE LVTLLEQTVV NTLAELGIEA 
HPRADAPGVY VGEKKICSLG LRIRRGCSFH GLALNVNMDL SPFLRINPCG YAGMEMAKIS 
QWKPEATTNN IAPRLLENIL ALLNNPDFEY ITA