Gene EcHS_A0657 details

Gene Information

• Locus tag: EcHS_A0657
• Symbol: ahpC
• ID: 5594643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 675026
• End bp: 675589
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640919838
• Product: alkyl hydroperoxide reductase subunit C
• Protein accession: YP_001457420
• Protein GI: 157160102
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTGA TTAACACCAA AATTAAACCT TTTAAAAACC AGGCATTCAA AAACGGCGAA 
TTCATCGAAA TCACCGAAAA AGATACCGAA GGCCGCTGGA GCGTCTTCTT CTTCTACCCG 
GCTGACTTTA CTTTCGTATG CCCGACCGAA CTGGGTGACG TTGCTGACCA CTACGAAGAA 
CTGCAGAAAC TGGGCGTAGA CGTATACGCA GTATCTACCG ATACTCACTT CACCCACAAA 
GCATGGCACA GCAGCTCTGA AACCATCGCT AAAATCAAAT ATGCGATGAT CGGCGACCCG 
ACTGGCGCCC TGACCCGTAA CTTCGACAAC ATGCGTGAAG ATGAAGGTCT GGCTGACCGT 
GCGACCTTCG TTGTTGACCC GCAGGGTATC ATCCAGGCAA TCGAAGTTAC CGCTGAAGGC 
ATTGGCCGTG ACGCGTCTGA CCTGCTGCGT AAAATCAAAG CAGCACAGTA CGTAGCTTCT 
CACCCAGGTG AAGTTTGCCC GGCTAAATGG AAAGAAGGTG AAGCAACTCT GGCTCCGTCT 
CTGGACCTGG TTGGTAAAAT CTAA 

 

Protein sequence

MSLINTKIKP FKNQAFKNGE FIEITEKDTE GRWSVFFFYP ADFTFVCPTE LGDVADHYEE 
LQKLGVDVYA VSTDTHFTHK AWHSSSETIA KIKYAMIGDP TGALTRNFDN MREDEGLADR 
ATFVVDPQGI IQAIEVTAEG IGRDASDLLR KIKAAQYVAS HPGEVCPAKW KEGEATLAPS 
LDLVGKI