Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0575 |
Symbol | |
ID | 5594106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 586582 |
End bp | 588996 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640919760 |
Product | efflux ABC transporter, permease protein |
Protein accession | YP_001457343 |
Protein GI | 157160025 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCAC GTTGGTTCTG GCGCGAATGG CGTTCGCCGT CGCTATTAAT TGTCTGGCTG GCGCTAAGCC TGGCGGTGGC CTGCGTGCTG GCGCTGGGCA ATATCAGCGA TCGCATGGAG AAGGGCTTAA GCCAGCAAAG CCGTGAGTTT ATGGCGGGCG ATCGGGCGTT GCGCAGTTCA CGCGAAGTGC CGCAAGCGTG GCTGGAGGAA GCGCAAAAGC GCGGCCTGAA AGTCGGCAAG CAGCTGACTT TCGCCACAAT GACCTTTGCA GGCGACACAC CGCAGCTGGC GAACGTCAAA GCGGTGGATG ATATCTACCC GATGTATGGC GATCTGCAAA CTAATCCCCC TGGCCTGAAA CCGCAGGCGG GCAGCGTATT GCTGGCCCCA CGCCTGATGG CACTGCTTAA CCTGAAAACG GGCGACACCA TTGACGTGGG CGATGCCACC TTGCGGATTG CCGGAGAAGT GATTCAGGAA CCGGATTCCG GTTTTAACCC CTTCCAGATG GCTCCGCGTC TGATGATGAA TCTGGCGGAT GTCGATAAAA CCGGAGCCGT GCAGCCGGGG AGTCGGGTCA CCTGGCGTTA TAAATTCGGC GGCAACGAGA ACCAGCTCGA CGGCTATGAG AAATGGTTGT TACCTCAGCT TAAACCCGAA CAACGCTGGT ACGGTCTGGA ACAGGACGAA GGCGCGCTGG GGCGATCGAT GGAACGCTCG CAACAGTTCC TGCTGCTTTC GGCGCTTCTG ACCTTGCTGC TGGCAGTGGC AGCGGTGGCG GTAGCGATGA ATCATTACTG TCGCAGTCGC TACGATCTGG TGGCGATCCT CAAAACGCTG GGGGCAGGGC GAGCGCAACT GCGTAAGCTA ATCGTCGGTC AGTGGTTGAT GGTGCTGACG CTTTCAGCCG TTACCGGTGG GGCCATAGGT CTGTTGTTCG AAAACGTGTT GATGGTGCTG CTCAAGCCCG TTCTGCCTGC TGCACTACCG CCAGCCAGCC TCTGGCCGTG GCTGTGGGCG CTTGGCACCA TGACGGTCAT CTCGCTGCTG GTGGGGCTAC GACCATATCG CTTGTTGCTG GCAACGCAGC CTTTACGCGT ATTACGTAAT GATGTGGTAG CGAACGTCTG GCCGCTGAAG TTTTATCTGC CGATTGTCAG TGTGGTGGTT GTGCTGCTGC TCGCCGGATT AATGGGTGGC AGCATGCTGC TTTGGGCGGT GCTGGCGGGC GCGGTAGTAC TGGCTTTGCT GTGCGGTGTG CTGGGCTGGA TGCTGCTGAA TGTACTTCGC CGCATGACGC TGAAATCGCT GCCTCTGCGC CTGGCGGTTA GCCGCCTGTT ACGTCAGCCG TGGTCAACGT TAAGTCAGCT TTCGGCATTT TCGCTCTCCT TTATGCTGCT GGCGCTGTTG CTGGTATTGC GTGGCGATCT GCTCGACCGC TGGCAGCAGC AGCTACCGCC AGAAAGCCCG AACTACTTTT TAATTAACAT CGCCACAGAA CAGGTAGCAC CGCTAAAAGC GTTCCTCGCG GAACATCATA TAGTCCCGGA ATCATTTTAT CCGGTAGTGC GGGCGCGGCT GACGGCGATT AACGATAAGC CGACAGAAGG TAATGAAGAT GAGGCGCTTA ATCGCGAACT CAATCTTACT TGGCAAAATA CGCGGCCCGA TCATAATCCG ATTGTCGCCG GTAACTGGCC GCCAAAAGCC GATGAAGTGT CGATGGAAGA GGGGCTGGCG AAACGCTTAA ACGTTGCCCT CGGTGATACC GTGACTTTTA TGGGCGATAC CCAGGAGTTC CGCGCTAAAG TGACCAGCCT GCGCAAAGTG GACTGGGAAA GTCTGCGGCC TAATTTCTAT TTTATTTTCC CGGAAGGGGC ATTAGACGGG CAACCGCAGA GCTGGCTTAC CAGTTTCCGC TGGGAGAATG GCAACGGCAT GTTGACGCAA CTCAACCGCC AGTTCCCGAC CATTAGCCTG TTAGATATTG GCGCGATTTT AAAACAGGTC GGTCAGGTGC TGGAGCAGGT AAGTCGGGCG CTGGAGGTGA TGGTGGTGCT GGTCACCGCC TGCGGTATGT TGCTGTTGCT GGCACAGGTG CAGGTGGGAA TGCGCCAGCG TCATCAGGAG CTGGTGGTAT GGCGCACACT CGGTGCGGGG AAAAAACTGC TGCGCACGAC ATTGTGGTGT GAGTTCGCCA TGCTTGGGTT TGTTTCCGGC CTGGTGGCCG CAATTGGTGC GGAAACGGCA CTGGCAGTGT TGCAGGCGAA AGTGTTTGAT TTCCCGTGGG AGCCAGACTG GCGATTGTGG ATTGTTCTGC CGTGCAGCGG TGCGCTGCTG CTGTCGCTTT TCGGCGGCTG GCTGGGCGCG AGACTGGTTA AGGGTAAGGC GCTGTTCAGG CAGTTTGCGG GGTGA
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Protein sequence | MIARWFWREW RSPSLLIVWL ALSLAVACVL ALGNISDRME KGLSQQSREF MAGDRALRSS REVPQAWLEE AQKRGLKVGK QLTFATMTFA GDTPQLANVK AVDDIYPMYG DLQTNPPGLK PQAGSVLLAP RLMALLNLKT GDTIDVGDAT LRIAGEVIQE PDSGFNPFQM APRLMMNLAD VDKTGAVQPG SRVTWRYKFG GNENQLDGYE KWLLPQLKPE QRWYGLEQDE GALGRSMERS QQFLLLSALL TLLLAVAAVA VAMNHYCRSR YDLVAILKTL GAGRAQLRKL IVGQWLMVLT LSAVTGGAIG LLFENVLMVL LKPVLPAALP PASLWPWLWA LGTMTVISLL VGLRPYRLLL ATQPLRVLRN DVVANVWPLK FYLPIVSVVV VLLLAGLMGG SMLLWAVLAG AVVLALLCGV LGWMLLNVLR RMTLKSLPLR LAVSRLLRQP WSTLSQLSAF SLSFMLLALL LVLRGDLLDR WQQQLPPESP NYFLINIATE QVAPLKAFLA EHHIVPESFY PVVRARLTAI NDKPTEGNED EALNRELNLT WQNTRPDHNP IVAGNWPPKA DEVSMEEGLA KRLNVALGDT VTFMGDTQEF RAKVTSLRKV DWESLRPNFY FIFPEGALDG QPQSWLTSFR WENGNGMLTQ LNRQFPTISL LDIGAILKQV GQVLEQVSRA LEVMVVLVTA CGMLLLLAQV QVGMRQRHQE LVVWRTLGAG KKLLRTTLWC EFAMLGFVSG LVAAIGAETA LAVLQAKVFD FPWEPDWRLW IVLPCSGALL LSLFGGWLGA RLVKGKALFR QFAG
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