Gene EcHS_A0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0500 
Symbol 
ID5592967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp510806 
End bp511801 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content44% 
IMG OID640919683 
Producthypothetical protein 
Protein accessionYP_001457268 
Protein GI157159950 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.113871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTT GGTGGTTAAT TATTATGGAA ATATATGACA GTGAGGACAT AAAGGTATAC 
ATGTTAACTA AAAGAATATT ATTTTCTGTA ATGCTGATAG TTTCACCAAG CGTGGTGGCC
AGCGAGAAAG CGCATGAATT GTATGACAGC ATATACGGTG GTAAACCTGC TCCCGATGTT
ATAAATACAC TGCATAAAAT GGCTGAATCG GGAGATATCG ACGCGCAGAG CCTGTTAGGC
TGGGAATATT ATCAGCCTCG TTATGATACC AAACCTGATG TTCAGGAAGC GATTAAATGG
TTCGAGTTAG CGGCTAAACA AGGTGACAGA GAAGCTCCGT TAGCGCTGGG GGGTATCTAC
TACGACGGTG AGCAGGTGCG GGTGGATTAT GCCAAAGCGT ATGCACTATT TAATCAGGCC
GCGCAGCACG GTGTGAATTT AGCATGGTCC AGGTTGGGCA TTATGTACGC CAATGGTCAG
TATGTTGAGG TAGATTGTAA GAAAGCGAAG GAATATCTTG ATAAAGGTGT CCACATTTAT
GGTGGCCCAG AAGACTTTCT GGCTACTTGT CGAAAAGACA TGATTGACAG AAAAACGGTT
GACGATACGT TACCCGTGAT TACGGTTACC CGTTCTGGGA TGCGAGATAA TTTTTTAGAT
AAAGGTTTTT CCTGCATGGA TAGCCTCTTC GCCACCACCA ATAAATTAGG CGAAGTGGCC
AATCTTCGCG TGACATTCAG CATTCGTCGC CCATCCGGTA AGGAGATTAA CCAAACGGTT
GGCTTCGCGC CTTTCGGTTT AAACCGGCTG AATATTAGCT TTACTGATTA CCTATTTGGT
TCATTTACCA GTAATTCGTC TCTTATTCTT TATAAACCGG AATTTGAGCG AAAATCTTGT
GCAACTGTAA GGACCACAAT CGTTGCCGCA ACGGCAACCA TTAACGGCAA GGATGTGGAG
TTGCTGAAAA CGGGGGCAAT TGAACAAAAG TGGTAA
 
Protein sequence
MDIWWLIIME IYDSEDIKVY MLTKRILFSV MLIVSPSVVA SEKAHELYDS IYGGKPAPDV 
INTLHKMAES GDIDAQSLLG WEYYQPRYDT KPDVQEAIKW FELAAKQGDR EAPLALGGIY
YDGEQVRVDY AKAYALFNQA AQHGVNLAWS RLGIMYANGQ YVEVDCKKAK EYLDKGVHIY
GGPEDFLATC RKDMIDRKTV DDTLPVITVT RSGMRDNFLD KGFSCMDSLF ATTNKLGEVA
NLRVTFSIRR PSGKEINQTV GFAPFGLNRL NISFTDYLFG SFTSNSSLIL YKPEFERKSC
ATVRTTIVAA TATINGKDVE LLKTGAIEQK W