| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0402 |
|---|
| Symbol | codA |
|---|
| ID | 5594590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 421674 |
|---|
| End bp | 422957 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640919587 |
|---|
| Product | cytosine deaminase |
|---|
| Protein accession | YP_001457172 |
|---|
| Protein GI | 157159854 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAATA ACGCTTTACA AACAATTATT AACGCCCGGT TACCAGGCAA AGAGGGGCTG
TGGCAGATTC ATCTGCAGGA CGGAAAAATC AGCGCCATTG ATGCGCAATC CGGCGTGATG
CCCATAACTG AAAACAGCCT GGATGCCGAA CAAGGTTTAG TTATACCGCC GTTTGTGGAG
CCGCATATTC ACCTGGACAC CACGCAAACC GCCGGACAAC CGAACTGGAA TCAGTCCGGC
ACGCTGTTTG AAGGCATTGA ACGCTGGGCC GAGCGCAAAG CGTTATTAAC CCATGACGAT
GTGAAACAAC GCGCCTGGCA AACGCTGAAA TGGCAGATTG CCAACGGCAT TCAGCATGTG
CGTACCCATG TCGATGTTTC GGATGCAACG CTAACTGCGC TGAAAGCAAT GCTGGAAGTG
AAGCAGGAAG TCGCGCCGTG GATTGATCTG CAAATTGTCG CCTTCCCTCA GGAAGGGATT
TTGTCGTATC CCAACGGTGA AGCGTTGCTG GAAGAGGCGT TACGCTTAGG GGCAGATGTA
GTGGGGGCGA TTCCGCATTT TGAATTTACC CGTGAATACG GCGTGGAGTC GCTGCATAAA
ACCTTCGCCC TGGCGCAAAA ATACGACCGT CTCATCGACG TTCACTGTGA TGAGATCGAT
GACGAGCAGT CGCGCTTTGT CGAAACCGTT GCTGCCCTGG CGCACCGTGA AGGCATGGGC
GCGCGAGTCA CCGCCAGCCA CACCACGGCA ATGCACTCCT ATAACGGGGC GTATACCTCA
CGCCTGTTCC GCTTGCTGAA AATGTCCGGT ATTAACTTTG TCGCCAACCC GCTGGTCAAT
ATTCATCTGC AAGGACGTTT CGATACGTAT CCAAAACGTC GCGGCATCAC GCGCGTTAAA
GAGATGCTGG AGTCCGGCAT TAACGTCTGC TTTGGTCACG ATGATGTCTT CGATCCGTGG
TATCCGCTGG GAACGGCGAA TATGCTGCAA GTGCTGCATA TGGGGCTGCA TGTTTGCCAG
TTGATGGGCT ACGGGCAGAT TAACGATGGC CTGAATTTAA TCACCCACCA CAGTGCCAGA
ACGTTGAATT TGCAGGATTA CGGCATTGCC GCCGGAAACA GCGCCAACCT GATTATCCTG
CCGGCTGAAA ATGGGTTTGA TGCGCTGCGC CGTCAGGTTC CGGTACGTTA TTCGGTACGT
GGCGGCAAGG TGATTGCCAG CACACAACCG GCACAAACCA CCGTATATCT GGAGCAGCCA
GAAGCCATCG ATTACAAACG GTAA
|
|---|
| Protein sequence | MSNNALQTII NARLPGKEGL WQIHLQDGKI SAIDAQSGVM PITENSLDAE QGLVIPPFVE
PHIHLDTTQT AGQPNWNQSG TLFEGIERWA ERKALLTHDD VKQRAWQTLK WQIANGIQHV
RTHVDVSDAT LTALKAMLEV KQEVAPWIDL QIVAFPQEGI LSYPNGEALL EEALRLGADV
VGAIPHFEFT REYGVESLHK TFALAQKYDR LIDVHCDEID DEQSRFVETV AALAHREGMG
ARVTASHTTA MHSYNGAYTS RLFRLLKMSG INFVANPLVN IHLQGRFDTY PKRRGITRVK
EMLESGINVC FGHDDVFDPW YPLGTANMLQ VLHMGLHVCQ LMGYGQINDG LNLITHHSAR
TLNLQDYGIA AGNSANLIIL PAENGFDALR RQVPVRYSVR GGKVIASTQP AQTTVYLEQP
EAIDYKR
|
|---|
| |