Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0375 |
Symbol | |
ID | 5591736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 393534 |
End bp | 394622 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640919560 |
Product | LuxR-family transcriptional regulator |
Protein accession | YP_001457146 |
Protein GI | 157159828 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.479547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCGC ATGATTTGAG TGTTTTTTTG GAAGAGTTCG GGGCAACGGT GAATTTGACG TTGCCTGGTA TCGTGTCCGA AAAAGAACGG CTTTTACTCA AGCTGCTAAT GGAGGGAATG TCGGTTACAG AAATCTCACA GTACAGAAAT CGCAGTGCAA AGACAATTTC ACATCAAAAG AAGCAGCTGT ATGAAAAACT AGGCATCCAG AGTGATATTA CCTTCTGGCG GGATATCTTT TTTCAATATC ATCCGCAAGT CATCAGTGGC ACGGGAAATA AAAATAATTT TTATATCCCT GATAACCGTT GTCACCATAT CGTCACGCCT GAAGCCATCA GTCTGGCGTT GGAAAACCAC GAATTCAAAC CGTGGATCCA ACCGGTTTTC TGCGCGCAGA CTGGGGTACT GACGGGCTGT GAGGTACTTG TCCGCTGGGA ACATCCACAA ACGGGAATTA TCCCACCGGA TCAGTTTATT CCTCTGGCGG AGTCATCCGG TCTTATTGTC ATAATGACCC GCCAACTGAT GAAACAGACT GCGGATATTC TGATGCCGGT AAAACATTTG CTGCCGGACA ATTTCCATAT TGGCATCAAC GTCTCGGCGG GTTGTTTTTT GGCAGCGGGA TTTGAAAAAG AGTGTCTGAA CCTGGTTAAG AAATTAGGTA ACGATAAAAT CAAGCTGGTT CTCGAGCTAA CGGAACGTAA TCCTATTCCG GTAACGCCAG AAGCCAGAGC GATATTTGAC AGCCTTCATC AGCACAACAT TACCTTTGCG CTGGATGACT TTGGTACGGG TTATGCGACC TATCGTTACT TGCAGGCGTT CCCGGTCGAT TTTATTAAGA TCGATAAGTC ATTTGTGCAA ATGGCGAGTG TCGACGAAAT CTCCGGTCAT ATTGTGGACA ATATTGTCGA ACTAGCGCGT AAGCCTGGTC TGAGTATCGT GGCGGAAGGG GTAGAAACCC AGGAGCAGGC GGATTTAATG ATCGGTAAAG GCGTTCACTT TTTGCAGGGC TATTTGTACT CTCCGCCAGT ACCGGGTAAT AAATTTATCT CTGAATGGGT AATGAAAGCA GGTGGTTGA
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Protein sequence | MASHDLSVFL EEFGATVNLT LPGIVSEKER LLLKLLMEGM SVTEISQYRN RSAKTISHQK KQLYEKLGIQ SDITFWRDIF FQYHPQVISG TGNKNNFYIP DNRCHHIVTP EAISLALENH EFKPWIQPVF CAQTGVLTGC EVLVRWEHPQ TGIIPPDQFI PLAESSGLIV IMTRQLMKQT ADILMPVKHL LPDNFHIGIN VSAGCFLAAG FEKECLNLVK KLGNDKIKLV LELTERNPIP VTPEARAIFD SLHQHNITFA LDDFGTGYAT YRYLQAFPVD FIKIDKSFVQ MASVDEISGH IVDNIVELAR KPGLSIVAEG VETQEQADLM IGKGVHFLQG YLYSPPVPGN KFISEWVMKA GG
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