Gene EcHS_A0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0272 
Symbol 
ID5594619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp291831 
End bp292991 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content49% 
IMG OID640919458 
Productphage integrase family site specific recombinase 
Protein accessionYP_001457044 
Protein GI157159726 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCA AACTACGCGG TGGCACGTGG CACTGCGATT TCGTCGCGCC AGATGGATCA 
AGAGTTAGAC GCTCTCTTGA AACATCGGAC AAAAGGCAAG CGCAAGAACT TCACGATCGT 
CTGAAAGCAG AAGCGTGGAG AGTAAAAAAT CTCGGGGAAT CACCGAAAAA GCTATTCAAG 
GAAGCCTGCA TACGGTGGCT GCGTGAGAAA TCGGATAAGA AGTCCATTGA TGATGACAAG 
AGCATTATAT CGTTCTGGAT GTTGCACTTC AGAGAAACCA TTCTCTCAGA CATAACAACA 
GAAAAAATAA TGGAGGCGGT AGACGGGATG GAAAACCGCC GCCATCGCCT GAACTGGGAA 
ATGAGCCGGG ACAGGTGTTT GCGGCTTGGC AAGCCAGTGC CGGAGTATAA ACCAAAGCTG 
GCAAGCAAAG GAACGAAGAC GCGGCATCTG GCAATACTTC GCGCTATTCT CAATATGGCT 
GTTGAATGGG GATGGCTTGA CAGGGCGCCC AAAATATCAA CACCACGCGT TAAGAATGGA 
CGAATCAGAT GGCTTACAGA GGAGGAATCG AAGCGCCTGT TTGCAGAAAT TGCTCCTCAT 
TTCTTCCCTG TGGTCATGTT TGCAATCACG ACAGGCCTTC GCCGTTCCAA CGTTACAGAC 
CTTGAGTGGT CACAGGTCGA TCTGGATAAG AAAATGGCAT GGATGCACCC TGATGAAACA 
AAAGCTGGCA ATGCGATCGG AGTTCCTCTT AACGAAACCG CATGCCAGAT ATTAAGAAAA 
CAGCAGGGTC TCCATAAGAG ATGGGTGTTT GTCCACACCA AACCTGCCTA CCGAAGCGAC 
GGAACAAAAA CAGCAGCGGT AAGGAAGATG AGAACCGACA GCAACAAGGC ATGGAAGGGA 
GCGTTAAAGC GGGCAGGCAT TAGCAACTTC CGCTTCCATG ACCTGAGGCA TACCTGGGCA 
AGCTGGCTGG TTCAGTCTGG TGTCTCTCTT CTTGCACTTA AAGAGATGGG AGGATGGGAA 
ACTCTCGAAA TGGTTCAAAG ATACGCCCAC CTTTCAGCCG GGCATCTCAC CGAGCACGCA 
AGCAAAATCG ATGCGATTAT AAGTCGCAAT GGCACAAATA CGGCACAAGA GGAGAACGTG 
GTTTACTTAA ATGCGAGGTA A
 
Protein sequence
MSIKLRGGTW HCDFVAPDGS RVRRSLETSD KRQAQELHDR LKAEAWRVKN LGESPKKLFK 
EACIRWLREK SDKKSIDDDK SIISFWMLHF RETILSDITT EKIMEAVDGM ENRRHRLNWE 
MSRDRCLRLG KPVPEYKPKL ASKGTKTRHL AILRAILNMA VEWGWLDRAP KISTPRVKNG 
RIRWLTEEES KRLFAEIAPH FFPVVMFAIT TGLRRSNVTD LEWSQVDLDK KMAWMHPDET 
KAGNAIGVPL NETACQILRK QQGLHKRWVF VHTKPAYRSD GTKTAAVRKM RTDSNKAWKG 
ALKRAGISNF RFHDLRHTWA SWLVQSGVSL LALKEMGGWE TLEMVQRYAH LSAGHLTEHA 
SKIDAIISRN GTNTAQEENV VYLNAR