Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0154 |
Symbol | fhuA |
ID | 5595319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 166532 |
End bp | 168721 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640919340 |
Product | ferrichrome outer membrane transporter |
Protein accession | YP_001456935 |
Protein GI | 157159617 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCGTT CCAAAACTGC TCAGCCAAAA CACTCACTGC GTAAAATCGC AGTTGTAGTA GCCACAGCGG TAAGCGGCAT GTCTGTTTAT GCACAGGCAG CGGTTGAACC GAAAGAAGAC ACTATCACCG TTACCGCTGC ACCTGCGCCG CAAGAAAGCG CATGGGGGCC TGCTGCAACT ATTGCGGCGA AGCACTCTGC TACTGCGACT AAAACGGATA CACCAATTGA AAAAACGCCG CAGTCTATTT CGGTTGTGAC AAATGAAGAG ATGCAGATGC ATCAATTTCA GTCTGTAAAA GAAGCATTAG GTTATACACC TGGCGTTACG GTTAGCAGTC GTGGTGCTTC TAATACATAT GATTTTGTTA TCATTCGTGG TTTCTCATCT GTTGGTCTGA ATCAAAATAA TTACCTTGAT GGACTAAAAC TTCAGGGCAA CTTTTATAAC GATGCTGTGA TTGATCCTTA CATGCTCGAG AGGGTTGAAC TGATGCGTGG GCCGACGTCT GTTCTCTATG GAAAAAGTAA TCCTGGTGGG ATTATTTCTA TGGTGAGTAA GCGTCCGACC ACTGAACCCC TGAAAGAAAT TCAGTTTAAA ATGGGGACGG ATAATCTGTT TCAGACTGGA TTCGATTTCA GTGATGCACT GGATGATAAC GGTGAGTTCT CCTACCGTTT GACGGGCCTC GCTCGTTCAA CAAACGAACA GCAGAAAAAT TCTGAATCCC AGCGTTATAC CATTGCTCCA TCATTCTCAT GGCGTCCAGA CGACAAAACC AATTTTACTT TCCTGTCCTA TTTCCAGAAT GAACCAGAAA CGGGTTATTA CGGTTGGTTG CCGAAAGAGG GGACCGTTGA GCCATTGCCT AATGGTAAAC GTCTACCGAC TGACTTCAAT GAAGGTGCAT CGAATAATAC ATACTCCCGT AACCAGAAAA TGGTGGGATA TAGTTTTGAA CATGGTTTTA ATGACACCTT CACCGTGCGT CAGAATCTGC GTTTCAGTGA AATGAAAACC TCACAGAAAA GTGTTTATGG CACAGGGATT GCCAACGATG GTCATACTCT AAACCGCGGG ACAGTGGTGG ATAATGAGCG TCTGCAAAAC TTTAGCGTTG ATACCCAACT TGAAAGTAAA TTTGCTACAG GTGAAGTGGA GCATACTTTG CTGACAGGGG TAGACTTCAT GCGTATGCGC AATGATATCA ATGCCAGCTT TGGATCTGCA CCATCAATCG ATCTTTATAA CAAATATCAT CCTGAATACT TTGCATTTGG TAACGCAGAG CCATACCAAA TGAATGAAAG CAAACAAACA GGTATTTATG TTCAGGATCA GGCGGAATGG AATAAATGGG TATTCACTCT GGGGGGACGC TACGATTGGT CTAAGCAAGC GACCACTGTT CGTGAAAACT CTTATACGCC GACTGAAGGT TATATTGAGC GTAATGATCA TCAGTTCACC TGGCGCGGTG GTGTAAATTA CTTATTCGAT AATGGTATTT CACCTTACTT TAGCTATAGC CAGTCCTTTG AACCGAGTGC TTTCGATCTG TGGAGCAACC CGCGCGTTTC CTATAAGCCA TCGAAAGGTG AACAGTATGA AGCTGGCGTA AAATATGTTC CGAATGATAT GCCGGTCGTT GTTACGGGCG CAGTCTATCA ATTGACGAAA ACAAATAACC TGACAGCAGA CCCAACAAAC CCGTTAGCGC AAGTCCCAGC AGGTGAGATT CGCGCTCGTG GTGTGGAGCT TGAAGCAAAA GCAGCGTTAA ATGCCAATAT TAACTTGACG GCTTCTTATA CCTACACGGA TGCGGAATAC ACCAAAGACA CCAATCTCAA AGGTAAAACT CCAGAACAAG TACCGGAGCA TATGGCATCT CTCTGGGGGG ATTATACCTT CAATGAAGGG CCGCTTTCTG GTTTAACATT GGGAACAGGT GGTCGTTTTA TTGGTTCCAG CTATGGTGAT CCGGCAAACA CTTTTAAAGT GGGTAGCGCA GCTGTAATGG ATGCTGTTGT AAAATATGAT CTGGCACGCT TTGGTATGGC GGGATCCAGC CTTGCTGTGA ACGTCAACAA TTTGCTCGAT CGTGAGTATG TTGCCAGTTG CTTCCAGACT TATGGCTGCT TCTGGGGCGC AGAACGTCAG GTCGTTGCAA CCGCAACCTT CCGTTTCTAA
|
Protein sequence | MARSKTAQPK HSLRKIAVVV ATAVSGMSVY AQAAVEPKED TITVTAAPAP QESAWGPAAT IAAKHSATAT KTDTPIEKTP QSISVVTNEE MQMHQFQSVK EALGYTPGVT VSSRGASNTY DFVIIRGFSS VGLNQNNYLD GLKLQGNFYN DAVIDPYMLE RVELMRGPTS VLYGKSNPGG IISMVSKRPT TEPLKEIQFK MGTDNLFQTG FDFSDALDDN GEFSYRLTGL ARSTNEQQKN SESQRYTIAP SFSWRPDDKT NFTFLSYFQN EPETGYYGWL PKEGTVEPLP NGKRLPTDFN EGASNNTYSR NQKMVGYSFE HGFNDTFTVR QNLRFSEMKT SQKSVYGTGI ANDGHTLNRG TVVDNERLQN FSVDTQLESK FATGEVEHTL LTGVDFMRMR NDINASFGSA PSIDLYNKYH PEYFAFGNAE PYQMNESKQT GIYVQDQAEW NKWVFTLGGR YDWSKQATTV RENSYTPTEG YIERNDHQFT WRGGVNYLFD NGISPYFSYS QSFEPSAFDL WSNPRVSYKP SKGEQYEAGV KYVPNDMPVV VTGAVYQLTK TNNLTADPTN PLAQVPAGEI RARGVELEAK AALNANINLT ASYTYTDAEY TKDTNLKGKT PEQVPEHMAS LWGDYTFNEG PLSGLTLGTG GRFIGSSYGD PANTFKVGSA AVMDAVVKYD LARFGMAGSS LAVNVNNLLD REYVASCFQT YGCFWGAERQ VVATATFRF
|
| |