Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_F0037 |
Symbol | repA |
ID | 5585671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009786 |
Strand | + |
Start bp | 30868 |
End bp | 31725 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640913756 |
Product | replication protein |
Protein accession | YP_001451406 |
Protein GI | 157149394 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03474] incFII family plasmid replication initiator RepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTGATC TTCAACAAAC GTATTACCGC CAGGTAAAGA ACCCGAATCC GGTGTTCACA CCCCGTGAAG GAGCAGGAAC GCTGCCGTTC TGCGAAAAAC TCATGGAAAA GGCGGTGGGC TTCACCTCCC GTTTTGATTT CGCCATTCAT GTGGCGCATG CCCGTTCCCG TGGTCTGCGT CGGCGCATGC CACCGGTGCT GCGTCGACGG GCTATTGATG CGCTCCTGCA GGGGCTGTGT TTCCACTATG ACCCGCTGGC CAACCGCGTC CAGTGCTCCA TCACCACACT GGCCATTGAG TGCGGACTGG CGACGGAGTC TGCTGCCGGA AAACTCTCCA TCACCCGTGC CACCCGGGCT CTGACGTTCC TGTCAGAGCT GGGACTGATT ACCTACCAGA CGGAATATGA TCCGCTTATC GGGTGCTACA TTCCGACCGA TATCACGTTC ACATCTGCAC TGTTTGCTGC CCTCGATGTA TCAGAGGAGG CAGTGGCCGC CGCGCGCCGC AGCCGTGTGG AATGGGAAAA CAGACAGCGC AAAAAGCAGG GGCTGGATAC CCTGGGTATG GATGAACTGA TAGCGAAAGC CTGGCGTTTT GTCCGTGAGC GTTTCCGCAG TTACCAGACA GAGCTTAAGT CCCGGGGAAT AAAGCGTGCC CGTGCGCGTC GTGATGCAGG CAGGGAACGT CAGGATATCG TCACCCTGGT GAAACGACAG CTGACGCGTG AAATCGCGGA AGGGCGCTTC ACTGCCAGTC GTGAGGCGGT AAAACGTGAA GTGGAGCGTC GTGTGAAGGA GCGCATGATT CTGTCACGTA ACCGTAATTA CAGCCGGCTG TCCACAGCTT CCCCCTGA
|
Protein sequence | MTDLQQTYYR QVKNPNPVFT PREGAGTLPF CEKLMEKAVG FTSRFDFAIH VAHARSRGLR RRMPPVLRRR AIDALLQGLC FHYDPLANRV QCSITTLAIE CGLATESAAG KLSITRATRA LTFLSELGLI TYQTEYDPLI GCYIPTDITF TSALFAALDV SEEAVAAARR SRVEWENRQR KKQGLDTLGM DELIAKAWRF VRERFRSYQT ELKSRGIKRA RARRDAGRER QDIVTLVKRQ LTREIAEGRF TASREAVKRE VERRVKERMI LSRNRNYSRL STASP
|
| |