Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_D0068 |
Symbol | |
ID | 5585788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009788 |
Strand | - |
Start bp | 64089 |
End bp | 64979 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640913880 |
Product | putative transposase |
Protein accession | YP_001451530 |
Protein GI | 157149442 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.565138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTAAGA AGAAAAACAC CACGACGCCC ACGCCGCATG ATGCCGCGTT CCGGTCGTTC CTGGCGAACC CCGACGTCGC CAGAGATTTT CTGGAACTGC ATCTTCCGGC GGAGTACCGG CAGTTGTGCG ACCTGTCCAC GCTGAAGCTG GAACCCGCCA CCTTTGTTGA GCCGGACCTG CATCAGTACG CCAGCGATAT CCTCTGGAGT GTGAAAACCA CCGGGGGTGA AGACGGCTAT GTTTATACGC TCATCGAGCA CCAGAGCACC GAAAATCTGT ACATGCCTTT CCGCATGTTA CGTTACAGTG TGGCGGCGAT GCAGAGACAT CTGGAGCAGC ACAAAACGTT GCCACTGGTG ATTCCTGTGC TGTTCTATCA TGGTGAGCGC AGCCCGTACC CGTACAGCAT GAACTGGCTG GACTGTTTTG AGAATCCGGT ACTTGCGGCT AAAATATACA CAAAGCCGTT TCCGCTGGTT GATATCACTG TCGTTGATGA CAATGAAATC ATGAACCATC GCCGGATGGC CGCACTGACG CTGCTGATGA AGCATATCCG CCATCGTGAC ATGATGGAGC TGCTGGACAA ACTCCCGCAG GTCATGGTGG AAATTTCAGA CGAGCAGGTG CGTGTTCTGA TTCATTACAT CGTTAACGCA GGGGACTCTG TATCACCGGA ATTTATGCGG GCGCTGGCTG AGCGTCTGCC GCAGCATGAG GATAAACTGA TGACTATCGC AGAACGTCTT GAGCAAAAAG GTCGCCAGGA AGGAGCGCTT GAAAAAGCCC TGGCTATTGC GTGCCAGCTT CAGAAAATGG GGATGACGCC GGAGCAGATT AAGCAGGCTA CCGGACTTTC CGATGACGAA CTGAAGAAAA TCACTCACTG A
|
Protein sequence | MSKKKNTTTP TPHDAAFRSF LANPDVARDF LELHLPAEYR QLCDLSTLKL EPATFVEPDL HQYASDILWS VKTTGGEDGY VYTLIEHQST ENLYMPFRML RYSVAAMQRH LEQHKTLPLV IPVLFYHGER SPYPYSMNWL DCFENPVLAA KIYTKPFPLV DITVVDDNEI MNHRRMAALT LLMKHIRHRD MMELLDKLPQ VMVEISDEQV RVLIHYIVNA GDSVSPEFMR ALAERLPQHE DKLMTIAERL EQKGRQEGAL EKALAIACQL QKMGMTPEQI KQATGLSDDE LKKITH
|
| |