| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4715 |
|---|
| Symbol | |
|---|
| ID | 5586261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4716519 |
|---|
| End bp | 4718021 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640928327 |
|---|
| Product | amino acid permease family protein |
|---|
| Protein accession | YP_001465658 |
|---|
| Protein GI | 157159432 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.212622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACA CGATAAAAAA GATGAGTCTG ATAGGACTCA TATTGATGAT CTTTACTTCC
GTATTTGGAT TTGCCAATAG CCCATCGGCT TATTACTTAA TGGGTTATAG TGCGATTCCC
TTTTATATAT TTTCTGCATT GTTATTCTTT ATTCCATTCG CCTTAATGAT GGCTGAAATG
GGAGCTGCTT ATCGCAAAGA AGAAGGTGGT ATCTATTCCT GGATGAATAA TAGTGTCGGA
CCACGTTTTG CCTTCATTGG TACGTTTATG TGGTTTTCCT CTTATATCAT CTGGATGGTG
AGTACCTCCG CGAAAGTTTG GGTACCGTTC TCAACATTCC TCTATGGTAG CGACATGACC
CAGCACTGGC GTATTGCCGG ACTGGAGCCT ACGCAGGTGG TTGGTCTGCT GGCAGTGGCA
TGGATGATTC TGGTCACCGT CGTTGCTTCA AAGGGGATTA ATAAAATTGC CCGCATTACT
GCGGTGGGCG GTATTGCAGT AATGTGTCTG AATTTAGTAT TGCTGTTAGT AAGCATTACT
ATTTTGTTAT TAAATGGTGG GCATTTCGCG CAGGATATTA ATTTCCTTGT ATCACCGAAC
CCAGGTTATC AGTCCGGTCT GGCAATGCTA TCGTTTGTGG TATTTGCTAT TTTTGCCTAT
GGCGGAATTG AAGCGGTTGG TGGTCTGGTC GATAAAACGG AAAATCCAGA AAAGAACTTT
GCCAAAGGTA TTGTTTTTGC CGCTATTGTT ATTTCAATCG GTTATTCGCT GGCAATATTT
TTATGGGGTG TCAGCACAAA CTGGCAGCAG GTATTAAGTA ATGGTTCCGT TAACCTCGGC
AATATTACCT ATGTGCTGAT GAAGAGCCTC GGGGTGACGC TGGGTAACGC ACTGCATTTG
TCACCTGAAG CGTCATTGTC GCTGGGTGTA TGGTTTGCGC GTATTACCGG ACTTTCGATG
TTCCTCGCTT ATACCGGGGC GTTCTTTACG CTTTGCTATT CACCGCTGAA AGCCATCATC
CAGGGGACGC CGAAAGCGTT GTGGCCGGAA CCGATGACGC GCCTGAATGC GATGGGGATG
CCGTCTATCG CCATGTGGAT GCAGTGCGGG TTGGTTACTG TCTTCATCCT GCTGGTTTCG
TTTGGTGGCG GTACCGCATC GGCGTTCTTT AACAAGCTGA CGCTGATGGC GAACGTGTCT
ATGACGCTTC CTTACCTGTT CCTCGCGCTG GCTTTCCCAT TTTTTAAAGC ACGTCAGGAT
CTCGACAGAC CATTTGTGAT TTTCAAAACG CATATGTCGG CAATGATTGC AACAGTGGTT
GTCGTACTGG TGGTGACATT TGCGAACGTC TTCACCATTA TTCAGCCTGT GGCTGAAGCC
GGAGACTGGG ACAGCACATT GTGGATGATT GGCGGCCCTG TCTTCTTCTC GCTGTTAGCG
ATGGCGATTT ACCAGAACTA TTGCAGTCGC ATGGCGAATA AACCTGAGTT AGCTCTCGAC
TGA
|
|---|
| Protein sequence | MPHTIKKMSL IGLILMIFTS VFGFANSPSA YYLMGYSAIP FYIFSALLFF IPFALMMAEM
GAAYRKEEGG IYSWMNNSVG PRFAFIGTFM WFSSYIIWMV STSAKVWVPF STFLYGSDMT
QHWRIAGLEP TQVVGLLAVA WMILVTVVAS KGINKIARIT AVGGIAVMCL NLVLLLVSIT
ILLLNGGHFA QDINFLVSPN PGYQSGLAML SFVVFAIFAY GGIEAVGGLV DKTENPEKNF
AKGIVFAAIV ISIGYSLAIF LWGVSTNWQQ VLSNGSVNLG NITYVLMKSL GVTLGNALHL
SPEASLSLGV WFARITGLSM FLAYTGAFFT LCYSPLKAII QGTPKALWPE PMTRLNAMGM
PSIAMWMQCG LVTVFILLVS FGGGTASAFF NKLTLMANVS MTLPYLFLAL AFPFFKARQD
LDRPFVIFKT HMSAMIATVV VVLVVTFANV FTIIQPVAEA GDWDSTLWMI GGPVFFSLLA
MAIYQNYCSR MANKPELALD
|
|---|
| |