| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4344 |
|---|
| Symbol | rhtC |
|---|
| ID | 5586324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4333458 |
|---|
| End bp | 4334072 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640927960 |
|---|
| Product | threonine efflux system |
|---|
| Protein accession | YP_001465309 |
|---|
| Protein GI | 157157002 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTTC TCACCGTCGC CATGGTGCAC ATTGTGGCGC TTATGAGCCC CGGTCCCGAT
TTCTTTTTTG TCTCTCAGAC CGCTGTCAGT CGTTCCCGTA AAGAAGCGAT GATGGGCGTG
CTGGGCATTA CCTGCGGCGT AATGGTTTGG GCTGGGATTG CGTTGCTTGG CCTGCATTTG
ATTATCGAAA AAATGGCCTG GCTGCATACG CTGATTATGG TGGGCGGTGG CCTGTATCTC
TGCTGGATGG GTTACCAGAT GCTACGCGGT GCACTGAAAA AAGAGGCTGT ATCTGCGCCT
ACACCACAGG TTGAGCTGGC GAAAAGCGGG CGCAGTTTCC TGAAAGGCTT ACTGACCAAT
CTCGCCAATC CGAAAGCGAT TATCTACTTT GGTTCGGTAT TCTCGCTGTT TGTCGGCGAT
AACGTCGGCA CCACTGAGCG CTGGGGCATT TTCGCGTTGA TTATTATCGA AACACTGGCG
TGGTTTACCG TCGTTGCCAG CCTGTTTGCC CTGCCGCAAA TGCGCCGTGG TTATCAACGT
CTGGCGAAGT GGATTGATGG TTTTGCCGGG GCGTTATTTG CCGGATTTGG CATTCATTTG
ATTATTTCGC GGTGA
|
|---|
| Protein sequence | MLFLTVAMVH IVALMSPGPD FFFVSQTAVS RSRKEAMMGV LGITCGVMVW AGIALLGLHL
IIEKMAWLHT LIMVGGGLYL CWMGYQMLRG ALKKEAVSAP TPQVELAKSG RSFLKGLLTN
LANPKAIIYF GSVFSLFVGD NVGTTERWGI FALIIIETLA WFTVVASLFA LPQMRRGYQR
LAKWIDGFAG ALFAGFGIHL IISR
|
|---|
| |