Gene EcE24377A_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4300 
SymbolrfbA2 
ID5587539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4295449 
End bp4296330 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID640927917 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001465270 
Protein GI157157955 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.671584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTA TTATCCTGGC GGGCGGTTCC GGCACCCGAT TGCATCCGAT TACGCGCGGC 
GTATCGAAGC AACTGTTGCC GATTTACGAT AAGCCAATGA TTTACTATCC GCTGTCGGTG
CTGATGTTGG CCGGTATCCG CGAAATTCTC ATCATCACTA CGCCGGAAGA TAAAGGTTAT
TTCCAGCGCC TGCTGGGCGA TGGTAGTGAG TTCGGTATCC AGCTGGAATA CGCCGAACAG
CCCAGCCCGG ACGGTCTGGC GCAGGCCTTT ATCATCGGTG AAACCTTCCT CAACGGTGAA
CCTTCTTGTC TGGTGCTGGG CGATAACATC TTCTTCGGTC AGGGCTTCAG TCCGAAGCTG
CGTCATGTTG CGGCGCGCAC GGAAGGGGCG ACGGTATTTG GCTATCAGGT GATGGACCCG
GAACGCTTTG GCGTGGTGGA GTTTGACGAC AATTTCCGCG CTATCTCGCT GGAAGAAAAG
CCAAAACAGC CGAAGTCAAA CTGGGCGGTG ACCGGGCTTT ATTTCTACGA CAGTAAAGTC
GTGGAGTACG CAAAGCAGGT GAAGCCGTCG GAGCGTGGTG AACTGGAGAT TACCTCCATC
AACCAGATGT ACCTCGAGGC GGGCAACCTG ACCGTTGAAC TGCTCGGGCG CGGATTTGCC
TGGCTGGACA CTGGCACTCA CGACAGCCTG ATTGAAGCCA GTACCTTTGT GCAGACAGTA
GAAAAACGCC AGGGCTTTAA GATTGCTTGC CTGGAAGAGA TCGCCTGGCG TAACGGCTGG
CTCGATGACG AGGGTGTGAA GCGTGCTGCC AGTTCATTAG CGAAAACTGG CTACGGCCAA
TATCTGCTGG AGTTACTTCG TGCCCGTCCG CGCCAGTATT GA
 
Protein sequence
MKGIILAGGS GTRLHPITRG VSKQLLPIYD KPMIYYPLSV LMLAGIREIL IITTPEDKGY 
FQRLLGDGSE FGIQLEYAEQ PSPDGLAQAF IIGETFLNGE PSCLVLGDNI FFGQGFSPKL
RHVAARTEGA TVFGYQVMDP ERFGVVEFDD NFRAISLEEK PKQPKSNWAV TGLYFYDSKV
VEYAKQVKPS ERGELEITSI NQMYLEAGNL TVELLGRGFA WLDTGTHDSL IEASTFVQTV
EKRQGFKIAC LEEIAWRNGW LDDEGVKRAA SSLAKTGYGQ YLLELLRARP RQY