Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4064 |
Symbol | xylH |
ID | 5587482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4046429 |
End bp | 4047610 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640927684 |
Product | D-xylose ABC transporter, permease protein |
Protein accession | YP_001465044 |
Protein GI | 157158260 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4214] ABC-type xylose transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAA GCAATCCGTC TGAAGTGAAA TTGGCCGTAC CGACATCCGG TGGCTTTTCC GGGCTGAATT CACTGAATTT GCAGGTCTTC GTGATGATTG CAGCTATCAT CGCAATCATG CTGTTCTTTA CCTGGACCAC CGATGGTGCC TACTTAAGCG CCCGTAACGT CTCCAACCTG TTACGCCAGA CCGCGATTAC CGGCATCCTC GCGGTAGGAA TGGTGTTCGT CATAATTTCT GCTGAAATCG ACCTTTCCGT CGGCTCAATG ATGGGGCTAT TAGGTGGCGT CGCGGCGATT TGTGACGTCT GGTTAGGCTG GCCTTTGCCA CTTACCATCA TTGTGACGTT GGTTCTGGGA CTGCTTCTCG GTGCCTGGAA CGGATGGTGG GTCGCGTACC GCAAAGTCCC TTCATTTATT GTCACCCTCG CGGGCATGTT GGCATTTCGC GGCATACTCA TTGGCATCAC CAACGGCACG ACTGTTTCCC CCACCAGCGC CGCGATGTCA CAAATTGGGC AAAGCTATCT ACCTGCCAGC ACTGGCTTCA TCATTGGCGC GCTTGGCTTA ATGGCTTTTG TTGGTTGGCA ATGGCGCGGA AGAATGCGCC GTCAGGCTTT GGGTTTGCAG TCTCCGGCCT CTACCGCAGT AGTCGGTCGC CAGGCTTTAA CCGCTATCAT CGTATTAGGC GCAATCTGGC TGTTGAATGA TTACCGTGGC GTTCCCACTC CTGTTCTGCT GCTGACGTTG CTGTTACTCG GCGGAATGTT TATGGCAACG CGGACGGCAT TTGGACGACG CATTTATGCC ATCGGCGGCA ATCTGGAAGC AGCACGTCTC TCCGGGATTA ACGTTGAACG CACCAAACTT GCCGTGTTCG CGATTAACGG ATTAATGGTA GCCATCGCCG GATTAATCCT TAGTTCTCGA CTTGGCGCTG GTTCACCTTC TGCGGGAAAT ATCGCCGAAC TGGACGCAAT TGCAGCATGC GTGATTGGCG GCACCAGCCT GGCTGGCGGA GTGGGAAGCG TTGCCGGAGC AGTAATGGGG GCATTTATCA TGGCTTCACT GGATAACGGC ATGAGTATGA TGGATGTACC GACCTTCTGG CAGTATATCG TTAAAGGTGC GATTCTGTTG CTGGCAGTAT GGATGGACTC CGCAACCAAA CGCCGTTCTT GA
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Protein sequence | MSKSNPSEVK LAVPTSGGFS GLNSLNLQVF VMIAAIIAIM LFFTWTTDGA YLSARNVSNL LRQTAITGIL AVGMVFVIIS AEIDLSVGSM MGLLGGVAAI CDVWLGWPLP LTIIVTLVLG LLLGAWNGWW VAYRKVPSFI VTLAGMLAFR GILIGITNGT TVSPTSAAMS QIGQSYLPAS TGFIIGALGL MAFVGWQWRG RMRRQALGLQ SPASTAVVGR QALTAIIVLG AIWLLNDYRG VPTPVLLLTL LLLGGMFMAT RTAFGRRIYA IGGNLEAARL SGINVERTKL AVFAINGLMV AIAGLILSSR LGAGSPSAGN IAELDAIAAC VIGGTSLAGG VGSVAGAVMG AFIMASLDNG MSMMDVPTFW QYIVKGAILL LAVWMDSATK RRS
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