Gene EcE24377A_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3981 
SymbolyhiR 
ID5590657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3956917 
End bp3957759 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content55% 
IMG OID640927603 
ProductDNA utilization protein YhiR 
Protein accessionYP_001464964 
Protein GI157158825 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTT ATCGCCACAG CTTTCACGCT GGCAACCACG CCGACGTCCT TAAACATACC 
GTTCAGAGCC TGATCATCGA GTCGCTGAAA GAGAAAGATA AACCGTTTTT CTATCTCGAC
ACCCACGCAG GGGCCGGGCG TTATCAGTTA GGCAGCGAAC ATGCCGAGCG TACCGGCGAA
TATCTCGAAG GCATCGCCCG TATCTGGCAG CAGGACGATT TGCCCGCAGA ACTGGAGGCG
TACATCAATG TGGTAAAACA CTTCAACCGT AGCGGTCAGT TGCGTTACTA CCCCGGTTCG
CCATTGATTG CTCGCCAGCT ACTGCGCGAA CAAGACAGCC TGCAACTGAC CGAACTGCAC
CCGAGCGATT ACCCGTTGCT GCGTTCTGAA TTTCAGAAAG ACAGCCGTGC GCGCGTCGAA
AAAGCCGATG GTTTCCAGCA GCTTAAGGCC AAACTGCCGC CGGTTTCCCG CCGTGGTTTA
ATCCTTATCG ACCCGCCGTA TGAAATGAAA ACCGACTATC AGGCGGTGGT CAGCGGGATA
GCAGAAGGTT ACAAACGTTT CGCCACTGGT ACTTACGCAC TGTGGTATCC GGTGGTGCTG
CGTCAGCAAA TTAAGCGCAT GATCCACGAT CTGGAAGCGA CCGGTATTCG CAAAATTCTG
CAAATTGAAC TGGCGGTACT GCCAGACAGC GATCGCCGTG GCATGACCGC TTCCGGCATG
ATTGTGATTA ACCCGCCGTG GAAACTGGAA CAGCAGATGA ATAACGTGCT GCCGTGGCTG
CACAGCAAAC TGGTTCCGGC AGGCACCGGG CACGCCACCG TAAGCTGGAT CGTGCCGGAG
TAA
 
Protein sequence
MLSYRHSFHA GNHADVLKHT VQSLIIESLK EKDKPFFYLD THAGAGRYQL GSEHAERTGE 
YLEGIARIWQ QDDLPAELEA YINVVKHFNR SGQLRYYPGS PLIARQLLRE QDSLQLTELH
PSDYPLLRSE FQKDSRARVE KADGFQQLKA KLPPVSRRGL ILIDPPYEMK TDYQAVVSGI
AEGYKRFATG TYALWYPVVL RQQIKRMIHD LEATGIRKIL QIELAVLPDS DRRGMTASGM
IVINPPWKLE QQMNNVLPWL HSKLVPAGTG HATVSWIVPE