| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3921 |
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| Symbol | |
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| ID | 5589133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 3899703 |
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| End bp | 3900881 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640927543 |
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| Product | HNH endonuclease domain-containing protein |
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| Protein accession | YP_001464904 |
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| Protein GI | 157157882 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA TTGTTTACCT GACAGTAACG GGAGAACAAC AAGGAAGCAT CTCCGCAGGT
TGTGGGACTT CTGAGTCTAC AGGTAATCGT TGGCAGAGCG GGCATGAGGA TGAAATATTT
ACATTCTCAC TCTTAAATAA TATTAATAAT ACGGGGCTTG GTTCACAGTT CCATGGTATA
ACATTTTGTA AATTAATTGA TAAAAGCACT CCATTATTTA TTAATTCCAT TAACAATAAT
GAACAATTAT TTATGGGATT TGACTTCTAT CGAATAAATA GATTTGGTAG ATGGGAAAAG
TATTATTATA TACAACTAAA AGGCGCTTTT TTATCGGCTA TTCATCATCA GATCATTCAA
AATCAACTGG ATACAGAAAC AATAACTGTT AGTTATGAAT TTATCCTCTG TCAACATCTT
ATCGCAAATA CCGAGTTCAG CTATTTGGCA CTCCCTGAAA ATTATAACCG TTTGTTTTTA
CCAAATTCAA AAAACCAAAC AAATAATCGT TTCAAAACGT TAAACAGCAA AGCTATTGGC
AGGCTACTTG CTGCTGGTGG CGTATACAAT GGGAACATTG AAGGATTCAG AAATACTGCG
GAAAAACTGG GTGGAGATGC AATAAAAGGC TATGATCAAA TACTAAATGA AAAAACAGCG
GGCATAGCGA TAGCAACAGC ATCTATTCTT TTAACAAAGC GTTCTAATGT TGATACATAT
ACAGAAATAA ATAGTTACTT AGGCAAACTT AGAGGTCAAC AAAAACTTCT TGATGGTATA
GACATAATAG AAATAATATA CATTAAGAGA CCTTCAAAAG ACTTAGCTAA CTTACGAAAG
GAGTTTAATA AAACTGTAAG AAAAAATTTT CTTATCAAAC TTGCAAAAAC CTCCGAAGCA
TCTGGAAGAT TCAACGCCGA AGACCTTTTA AGAATGAGAA AGGGCAATGT TCCTCTAAAT
TATAATGTTC ACCATAAACT ATCTCTAGAT GATGGTGGTA CTAATGATTT CGAAAATTTA
GTATTAATCG AAAACGAACC ATATCATAAA GTTTTTACTA ACATGCAATC ACGAATAGCT
AAGGGAATAT TAGTAGGTGA AAGCAAAATC ACTCCCTGGG CCATTCCATC TGGCTCAATT
TATCCTCCCA TGAAAAATAT TATGGACCAC ACAAAATGA
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| Protein sequence | MSNIVYLTVT GEQQGSISAG CGTSESTGNR WQSGHEDEIF TFSLLNNINN TGLGSQFHGI
TFCKLIDKST PLFINSINNN EQLFMGFDFY RINRFGRWEK YYYIQLKGAF LSAIHHQIIQ
NQLDTETITV SYEFILCQHL IANTEFSYLA LPENYNRLFL PNSKNQTNNR FKTLNSKAIG
RLLAAGGVYN GNIEGFRNTA EKLGGDAIKG YDQILNEKTA GIAIATASIL LTKRSNVDTY
TEINSYLGKL RGQQKLLDGI DIIEIIYIKR PSKDLANLRK EFNKTVRKNF LIKLAKTSEA
SGRFNAEDLL RMRKGNVPLN YNVHHKLSLD DGGTNDFENL VLIENEPYHK VFTNMQSRIA
KGILVGESKI TPWAIPSGSI YPPMKNIMDH TK
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