Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3797 |
Symbol | rpsC |
ID | 5589386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3778995 |
End bp | 3779696 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640927421 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001464782 |
Protein GI | 157157923 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000046077 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTCAGA AAGTACATCC TAATGGTATT CGCCTGGGTA TTGTAAAACC ATGGAACTCT ACCTGGTTTG CGAACACCAA AGAATTCGCT GACAACCTGG ACAGCGATTT TAAAGTACGT CAGTACCTGA CTAAGGAACT GGCTAAAGCG TCCGTATCTC GTATCGTTAT CGAGCGTCCG GCTAAGAGCA TCCGTGTAAC CATTCACACT GCTCGCCCGG GTATCGTTAT CGGTAAAAAA GGTGAAGACG TAGAAAAACT GCGTAAGGTC GTAGCGGACA TCGCTGGCGT TCCTGCACAG ATCAACATCG CCGAAGTTCG TAAGCCTGAA CTGGACGCAA AACTGGTTGC TGACAGCATC ACTTCTCAGC TGGAACGTCG CGTTATGTTC CGTCGTGCTA TGAAGCGTGC TGTACAGAAC GCAATGCGTC TGGGCGCTAA AGGTATTAAA GTTGAAGTTA GCGGCCGTCT GGGCGGCGCG GAAATCGCAC GTACCGAATG GTACCGCGAA GGTCGCGTAC CGCTGCACAC TCTGCGTGCT GACATCGACT ACAACACCTC TGAAGCGCAC ACCACTTACG GTGTAATCGG CGTTAAAGTG TGGATCTTCA AAGGCGAGAT CCTGGGTGGT ATGGCTGCTG TTGAACAACC GGAAAAACCG GCTGCTCAGC CTAAAAAGCA GCAGCGTAAA GGCCGTAAAT AA
|
Protein sequence | MGQKVHPNGI RLGIVKPWNS TWFANTKEFA DNLDSDFKVR QYLTKELAKA SVSRIVIERP AKSIRVTIHT ARPGIVIGKK GEDVEKLRKV VADIAGVPAQ INIAEVRKPE LDAKLVADSI TSQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYNTSEAH TTYGVIGVKV WIFKGEILGG MAAVEQPEKP AAQPKKQQRK GRK
|
| |