| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3771 |
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| Symbol | rsmB |
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| ID | 5587411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 3765020 |
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| End bp | 3766309 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640927395 |
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| Product | 16S rRNA methyltransferase B |
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| Protein accession | YP_001464756 |
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| Protein GI | 157157639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.075284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AACGTAATTT ACGTAGCATG GCGGCCCAGG CCGTTGAACA AGTCGTCGAG
CAAGGGCAAT CATTAAGCAA CATTCTGCCA CCGCTCCAGC AAAAAGTTTC CGATAAAGAC
AAAGCACTTC TTCAAGAGTT GTGCTTTGGC GTACTGCGTA CGCTTTCGCA GTTAGACTGG
CTGATTAATA AGTTAATGGC CCGTCCGATG ACCGGCAAAC AGCGGACCGT GCATTACCTG
ATTATGGTTG GTTTGTATCA ACTGCTTTAT ACCCGCATTC CACCTCATGC TGCGCTGGCT
GAAACGGTTG AAGGCGCTAT CGCAATTAAG CGTCCGCAAC TTAAAGGGTT GATAAACGGT
GTATTACGCC AGTTCCAGCG TCAGCAAGAA GAGTTATTAG CCGAGTTTAA TGCCAGTGAT
GCACGTTATC TGCATCCTTC CTGGTTGCTG AAGCGTCTGC AAAAAGCGTA TCCAGAGCAG
TGGCAATCCA TCGTCGAAGC CAATAACCAG CGTCCGCCAA TGTGGCTGCG CGTTAATCGT
ACGCATCATT CCCGCGACAG CTGGCTTGCA TTGTTGGATG AAGCAGGAAT GAAAGGTTTC
CCGCATGCGG ATTACCCTGA TGCTGTACGG CTGGAAACAC CTGCACCTGT TCATGCGCTA
CCTGGTTTTG AAGACGGATG GGTTACCGTT CAGGATGCAT CAGCACAAGG TTGCATGACC
TGGCTTGCGC CACAAAACGG TGAACACATT CTGGATCTTT GTGCCGCCCC CGGCGGTAAA
ACAACGCATA TCCTTGAGGT GGCACCAGAA GCGCAGGTTG TTGCGGTTGA TATTGACGAA
CAGCGCCTCT CTCGCGTTTA CGACAATTTA AAACGCCTTG GTATGAAAGC GACCGTGAAA
CAAGGTGATG GCCGCTACCC TTCCCAATGG TGTGGCGAGC AACAGTTTGA TCGCATTTTA
TTAGATGCGC CTTGTTCAGC AACCGGTGTG ATTCGTCGCC ATCCGGATAT TAAATGGTTA
CGTCGCGATC GCGATATCCC GGAACTCGCG CAATTGCAGT CTGAAATTCT CGACGCCATT
TGGCCGCATT TAAAATCCGG TGGAACCCTG GTCTATGCCA CCTGTTCGGT GTTACCGGAA
GAGAATAGCC TGCAGATTAA AGCCTTTTTG CAACGTACCG CTGATGCCGA ACTTTGCGAA
ACAGGAACAC CAGAGCAACC GGGTAAACAA AATCTGCCTG GTGCCGAAGA GGGCGACGGC
TTCTTTTACG CTAAGCTAAT CAAAAAGTGA
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| Protein sequence | MKKQRNLRSM AAQAVEQVVE QGQSLSNILP PLQQKVSDKD KALLQELCFG VLRTLSQLDW
LINKLMARPM TGKQRTVHYL IMVGLYQLLY TRIPPHAALA ETVEGAIAIK RPQLKGLING
VLRQFQRQQE ELLAEFNASD ARYLHPSWLL KRLQKAYPEQ WQSIVEANNQ RPPMWLRVNR
THHSRDSWLA LLDEAGMKGF PHADYPDAVR LETPAPVHAL PGFEDGWVTV QDASAQGCMT
WLAPQNGEHI LDLCAAPGGK TTHILEVAPE AQVVAVDIDE QRLSRVYDNL KRLGMKATVK
QGDGRYPSQW CGEQQFDRIL LDAPCSATGV IRRHPDIKWL RRDRDIPELA QLQSEILDAI
WPHLKSGGTL VYATCSVLPE ENSLQIKAFL QRTADAELCE TGTPEQPGKQ NLPGAEEGDG
FFYAKLIKK
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