Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3764 |
Symbol | aroE |
ID | 5588912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3759833 |
End bp | 3760651 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640927388 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001464749 |
Protein GI | 157157510 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000795686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCT ATGCTGTTTT TGGTAATCCG ATAGCCCACA GCAAATCGCC ATTCATTCAT CAGCAATTTG CTCAGCAACT GAATATTGAA CATCCCTATG GGCGCGTGTT GGCACCCATC AATGATTTCA TCAACACACT GAACGCTTTC TTTCGTGCTG GTGGTAAAGG TGCGAATGTG ACGGTGCCTT TTAAAGAAGA GGCTTTTGCC AGAGCGGATG AGCTTACTGA ACGGGCAGCG TTGGCTGGTG CTGTTAATAC CCTCAAGCGG TTAGAAGATG GACGCCTGCT GGGTGACAAT ACCGATGGTA TAGGTTTGTT AAGCGATCTG GAACGTCTGT CTTTTATCCG TCCTGGTTTA CGTATTCTGC TCATCGGCGC TGGTGGAGCA TCTCGCGGCG TACTACTGCC ACTTCTTTCC CTGGACTGTG CGGTGACAAT CACTAATCGG ACGGTATCCC GCGCGGAAGA GTTGGCTAAA TTGTTTGCGC ACACTGGCAG TATTCAGGCG TTGGGTATGG ACGAACTGGA AGGTCATGAG TTTGATCTCA TTATTAATGC AACATCCAGT GGCATCAGTG GTGATATTCC GGCGATCCCG TCATCGCTCA TTCATCCAGG CATTTATTGC TATGACATGT TCTATCAGAA AGGAAAAACT CCTTTTCTGG CATGGTGTGA GCAGCGAGGC TCAAAGCGTA ATGCTGATGG TTTAGGAATG CTGGTGGCAC AGGCGGCTCA TGCCTTTCTT CTCTGGCACG GTGTTCTGCC TGACGTAGAA CCAGTTATAA AGCAATTGCA GGAGGAATTG TCCGCGTGA
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Protein sequence | METYAVFGNP IAHSKSPFIH QQFAQQLNIE HPYGRVLAPI NDFINTLNAF FRAGGKGANV TVPFKEEAFA RADELTERAA LAGAVNTLKR LEDGRLLGDN TDGIGLLSDL ERLSFIRPGL RILLIGAGGA SRGVLLPLLS LDCAVTITNR TVSRAEELAK LFAHTGSIQA LGMDELEGHE FDLIINATSS GISGDIPAIP SSLIHPGIYC YDMFYQKGKT PFLAWCEQRG SKRNADGLGM LVAQAAHAFL LWHGVLPDVE PVIKQLQEEL SA
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