| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3545 |
|---|
| Symbol | |
|---|
| ID | 5589174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 3555889 |
|---|
| End bp | 3557322 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640927171 |
|---|
| Product | amino acid permease family protein |
|---|
| Protein accession | YP_001464540 |
|---|
| Protein GI | 157154777 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA CCAAACGTAA TACAATCGGC AAATTCGGCT TGCTCTCGCT GACTTTTGCC
GCCGTTTACA GCTTTAACAA CGTTATCAAT AATAATATTG AGCTTGGACT GGCCTCGGCA
CCGATGTTTT TCCTCGCGAC GATTTTTTAT TTTATTCCCT TCTGTCTGAT CATCGCAGAA
TTTGTTTCGT TAAATAAAAA CTCAGAAGCC GGTGTCTACG CGTGGGTAAA AAGTTCGCTG
GGCGGACGTT GGGCATTTAT TACTGCCTAT ACCTACTGGT TCGTAAACCT GTTCTTTTTC
ACCTCACTGT TGCCGCGCGT TATTGCTTAT GCTTCGTATG CCTTCCTCGG ATACGAATAT
ATTATGACGC CGGTTGCCAC CACCATTATC AGTATGGTGC TGTTCGCCTT CTCCACCTGG
GTTTCCACCA ACGGGGCGAA AATGTTGGGG CCAATTACCT CCGTCACTTC AACGCTGATG
CTGCTGTTAA CGCTCTCCTA CATTTTACTG GCAGGTACGG CGCTGGTTGG CGGCGTACAG
CCTGCTGACC CCATCACCGT TGACGCGATG ATCCCGAACT TCAACTGGGC GTTCCTCGGC
GTTACCACCT GGATCTTTAT GGCCGCAGGT GGCGCGGAGT CCGTCGCTGT GTACGTTAAC
GACGTCAAAG GCGGTTCGAA ATCGTTCGTT AAAGTGATCA TCCTCGCCGG GATTTTTATC
GGCGTACTGT ATTCCGTCTC CTCGGTGCTG ATTAACGTCT TCGTCAGCAG CAAAGAGTTG
AAATTTACCG GCGGATCGGT GCAGGTATTC CACGGCATGG CGGCGTATTT TGGTCTACCG
GAAGCGTTGA TGAATCGCTT TGTCGGTCTG GTGTCCTTTA CCGCGATGTT CGGTTCCCTG
CTGATGTGGA CCGCAACGCC GGTGAAAATT TTCTTCTCCG AAATCCCGGA AGGCATCTTT
TGTAAGAAAA CCGTCGAACT GAACGAAAAC GGCGTTCCGG CGCGCGCAGC GTGGATCCAG
TTCCTGATCG TCATCCCGCT GATGATTATC CCGATGCTCG GTTCCAATAC CGTGCAGGAT
CTGATGAATA CTATTATTAA TATGACCGCC GCAGCGTCCA TGCTTCCGCC GTTATTCATC
ATGCTGGCTT ACCTGAATTT ACGCGCCAAA TTAGATCACC TGCCACGCGA TTTCCGTATG
GGCTCCCGCC GCACCGGTAT TATCGTTGTT TCAATGCTGA TTGCGATATT TGCCGTAGGG
TTTGTCGCTT CGACATTCCC GACTGGCGCG AATATTCTGA CCATCATTTT TTATAACGTC
GGCGGTATTG TTATCTTCCT TGGCTTTGCG TGGTGGAAAT ACAGTAAATA TATAAAGGGA
TTAACGGCTG AAGAGCGCCA TATTGAAGCG ACGCCAGCCA GCAATGTTGA TTAA
|
|---|
| Protein sequence | MSDTKRNTIG KFGLLSLTFA AVYSFNNVIN NNIELGLASA PMFFLATIFY FIPFCLIIAE
FVSLNKNSEA GVYAWVKSSL GGRWAFITAY TYWFVNLFFF TSLLPRVIAY ASYAFLGYEY
IMTPVATTII SMVLFAFSTW VSTNGAKMLG PITSVTSTLM LLLTLSYILL AGTALVGGVQ
PADPITVDAM IPNFNWAFLG VTTWIFMAAG GAESVAVYVN DVKGGSKSFV KVIILAGIFI
GVLYSVSSVL INVFVSSKEL KFTGGSVQVF HGMAAYFGLP EALMNRFVGL VSFTAMFGSL
LMWTATPVKI FFSEIPEGIF CKKTVELNEN GVPARAAWIQ FLIVIPLMII PMLGSNTVQD
LMNTIINMTA AASMLPPLFI MLAYLNLRAK LDHLPRDFRM GSRRTGIIVV SMLIAIFAVG
FVASTFPTGA NILTIIFYNV GGIVIFLGFA WWKYSKYIKG LTAEERHIEA TPASNVD
|
|---|
| |