| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3425 |
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| Symbol | gspF |
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| ID | 5586655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3432121 |
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| End bp | 3433344 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640927052 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001464422 |
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| Protein GI | 157154920 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTGT TTTACTATCA GGCGCTGGAG CGTAATGGTC GCAAAACCAA AGGTATGATT
GAGGCGGATT CCGCGCGTCA TGCCCGCCAG TTGTTGCGCG GTAAAGAGCT TATCCCCGTG
CATATTGAAG CCCGGATGAA TACTTCGTCA GGGGGGATGT TGCAGCGTCG GCGGCACGCA
CATCGTCGCG TGGCGGCGGC AGATCTTGCG CTGTTCACGC GCCAACTGGC AACGCTGGTA
CAGGCAGCAA TGCCGCTGGA AACCTGCTTA CAGGCGGTCA GTGAGCAAAG TGAAAAACTG
CATGTAAAAA GCCTCGGAAT GGCGCTGCGC AGCCGGATTC AGGAAGGTTA CACCCTGTCG
GACAGCCTGC GCGAACATCC CCGCGTCTTT GATTCTCTGT TTTGTTCGAT GGTTGCTGCC
GGAGAAAAAT CCGGGCATCT CGACGTGGTG CTTAATCGCC TGGCAGATTA CACCGAACAG
CGACAGCGCC TGAAATCACG TCTATTGCAG GCCATGCTCT ATCCGCTGGT TCTGCTGGTG
GTGGCAACGG GCGTAGTCAC TATTTTGCTG ACGGCAGTGG TGCCGAAAAT CATCGAACAG
TTTGATCATC TCGGACACGC GCTACCCGCC TCAACCCGCA CGCTTATTGC CATGAGCGAC
GCGTTACAGG CCAGCGGCGT TTACTGGCTG GCGGGATTGC TGGCGCTTCT GGTGCTGGGG
CAACGGCTAC TTAAAAATCC TACTATGCGC CTGCGCTGGG ATAAAACCGT GCTGCGTCTG
CCCGTGACAG GGCGTGTTGC GCGCGGGCTG AATACGGCGC GTTTTTCCCG CACCTTAAGC
ATCCTCACCG CCAGCAGTGT TCCGCTACTG GAAGGTATTC AGACCGCTGC CGCTGTGTCG
GCAAATCGCT ATGTCGAACA ACAACTACTG CTGGCGGCAG ATCGCGTCCG CGAAGGAAGC
AGTCTGCGCG CCGCGCTGGC GGAGTTGCGC CTGTTCCCCC CGATGATGCT GTACATGATC
GCCTCCGGCG AACAGAGCGG CGAACTGGAA ACCATGCTTG AGCAGGCCGC TGTTAACCAG
GAACGGGAAT TTGATACCCA GGTGGGGCTG GCGTTGGGGC TGTTTGAGCC TGCGCTGGTG
GTGATGATGG CGGGCGTGGT GCTGTTTATT GTCATCGCCA TCCTCGAGCC GATGCTGCAA
CTGAATAATA TGGTTGGAAT GTAA
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| Protein sequence | MALFYYQALE RNGRKTKGMI EADSARHARQ LLRGKELIPV HIEARMNTSS GGMLQRRRHA
HRRVAAADLA LFTRQLATLV QAAMPLETCL QAVSEQSEKL HVKSLGMALR SRIQEGYTLS
DSLREHPRVF DSLFCSMVAA GEKSGHLDVV LNRLADYTEQ RQRLKSRLLQ AMLYPLVLLV
VATGVVTILL TAVVPKIIEQ FDHLGHALPA STRTLIAMSD ALQASGVYWL AGLLALLVLG
QRLLKNPTMR LRWDKTVLRL PVTGRVARGL NTARFSRTLS ILTASSVPLL EGIQTAAAVS
ANRYVEQQLL LAADRVREGS SLRAALAELR LFPPMMLYMI ASGEQSGELE TMLEQAAVNQ
EREFDTQVGL ALGLFEPALV VMMAGVVLFI VIAILEPMLQ LNNMVGM
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