Gene EcE24377A_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3220 
SymbolxerD 
ID5588602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3242308 
End bp3243204 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content53% 
IMG OID640926859 
Productsite-specific tyrosine recombinase XerD 
Protein accessionYP_001464231 
Protein GI157158312 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAGG ATCTGGCACG CATCGAGCAG TTTCTTGATG CTCTGTGGCT GGAAAAAAAT 
CTGGCTGAAA ATACGTTGAA CGCTTACCGT CGCGATCTGT CAATGATGGT GGAGTGGTTG
CATCACCGCG GGTTGACGCT GGCGACGGCG CAAAGTGACG ATTTGCAGGC ATTACTGGCA
GAACGGCTGG AGGGCGGGTA TAAAGCCACC AGCTCAGCGC GTTTGCTGAG TGCAGTGCGC
CGATTGTTCC AGTATCTTTA TCGCGAAAAG TTTCGTGAAG ACGATCCCAG TGCGCATCTC
GCTTCACCGA AATTGCCACA GCGTTTGCCA AAAGATTTAA GCGAAGCGCA GGTCGAACGT
TTATTACAGG CACCATTAAT TGATCAGCCA CTGGAGCTAC GCGATAAAGC CATGCTTGAA
GTGTTGTATG CTACCGGGCT GCGTGTCTCT GAACTGGTCG GACTGACAAT GAGTGATATC
AGCCTGCGTC AGGGCGTAGT GCGGGTCATT GGTAAAGGCA ACAAAGAGCG CCTGGTGCCG
TTAGGTGAAG AGGCGGTTTA CTGGCTGGAA ACGTATCTCG AGCATGGGCG ACCGTGGTTG
TTGAACGGTG TCTCTATTGA TGTGTTGTTC CCCAGCCAGC GTGCGCAGCA GATGACGCGA
CAGACCTTCT GGCACCGCAT TAAACATTAT GCCGTGCTGG CGGGTATCGA CAGCGAAAAG
CTGTCACCGC ATGTGTTGCG TCACGCTTTT GCCACCCATT TATTAAATCA TGGTGCGGAT
TTACGCGTGG TGCAGATGCT ACTGGGCCAC AGCGATCTTT CCACCACGCA AATTTATACG
CATGTCGCTA CCGAGCGTCT GCGGCAACTT CATCAACAGC ATCACCCGCG GGCGTGA
 
Protein sequence
MKQDLARIEQ FLDALWLEKN LAENTLNAYR RDLSMMVEWL HHRGLTLATA QSDDLQALLA 
ERLEGGYKAT SSARLLSAVR RLFQYLYREK FREDDPSAHL ASPKLPQRLP KDLSEAQVER
LLQAPLIDQP LELRDKAMLE VLYATGLRVS ELVGLTMSDI SLRQGVVRVI GKGNKERLVP
LGEEAVYWLE TYLEHGRPWL LNGVSIDVLF PSQRAQQMTR QTFWHRIKHY AVLAGIDSEK
LSPHVLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HVATERLRQL HQQHHPRA