| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3158 |
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| Symbol | lysA |
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| ID | 5588244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3174330 |
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| End bp | 3175592 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640926800 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001464173 |
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| Protein GI | 157157020 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.856232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACATT CACTGTTCAG CACCGATACC GATCTCACCG CCGAAAATCT GCTGCGTTTG
CCCGCTGAAT TTGGCTGCCC GGTGTGGGTC TACGATGCGC AAATTATTCG TCGGCAGATT
GCAGCGCTGA AACAGTTTGA TGTGGTGCGC TTTGCACAGA AAGCCTGTTC CAATATTCAT
ATTTTGCGAT TAATGCGTGA GCAGGGCGTG AAAGTGGATT CCGTCTCGTT AGGCGAAATA
GAGCGTGCGT TGGCGGCGGG TTACAATCCG CAAACGCACC CCGATGATAT TGTTTTTACG
GCAGATGTTA TCGATCAGGC GACGCTTGAA CGCGTCAGTG AATTGCAAAT TCCGGTGAAT
GCGGGTTCTG TTGATATGCT CGACCAACTG GGCCAGGTTT CGCCAGGGCA TCGGGTATGG
CTGCGCGTTA ACCCGGGGTT TGGTCACGGA CATAGCCAAA AAACCAATAC CGGTGGCGAA
AACAGCAAGC ACGGTATCTG GTACACCGAT CTGCCCGCCG CACTGGACGT GATACAACGT
CATCATTTGC AGCTGGTCGG CATTCACATG CACATTGGTT CTGGCGTTGA TTATGCCCAT
CTGGAACAGG TGTGTGGTGC TATGGTACGT CAGGTCATCG AATTCGGTCA GGATTTACAG
GCTATTTCTG CGGGCGGTGG GCTTTCTATT CCTTATCAAC AGGGTGAAGA GGCGGTTGAT
ACCGAACATT ATTATGGTCT GTGGAATGCC GCGCGTGAGC AAATCGCTCG CCATTTGGGC
CACCCTGTGA AACTGGAAAT TGAACCGGGT CGCTTTCTGG TAGCGCAGTC TGGCGTGTTA
ATTACTCAGG TGCGGAGCGT CAAACAAATG GGTAGCCGCC ACTTTGTGCT GGTTGATGCC
GGGTTCAACG ATCTGATGCG CCCGGCAATG TACGGTAGTT ACCACCATAT CAGTGCCCTG
GCAGCTGATG GTCGTTCTCT GGAACACGCG CCAACGGTGG AAACCGTCGT CGCCGGGCCA
TTATGTGAAT CGGGCGATGT CTTTACCCAG CAGGAAGGGG GAAATGTTGA AACCCGCGCC
TTGCCGGAAG TGAAGGCGGG TGATTATCTG GTACTGCATG ATACAGGGGC ATATGGCGCA
TCAATGTCAT CCAACTACAA TAGCCGTCCG CTGTTACCAG AAGTTCTGTT TGATAATGGT
CAGGCGCGGT TGATTCGCCG TCGTCAGACC ATCGAAGAAT TACTGGCGCT GGAATTGCTT
TAA
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| Protein sequence | MPHSLFSTDT DLTAENLLRL PAEFGCPVWV YDAQIIRRQI AALKQFDVVR FAQKACSNIH
ILRLMREQGV KVDSVSLGEI ERALAAGYNP QTHPDDIVFT ADVIDQATLE RVSELQIPVN
AGSVDMLDQL GQVSPGHRVW LRVNPGFGHG HSQKTNTGGE NSKHGIWYTD LPAALDVIQR
HHLQLVGIHM HIGSGVDYAH LEQVCGAMVR QVIEFGQDLQ AISAGGGLSI PYQQGEEAVD
TEHYYGLWNA AREQIARHLG HPVKLEIEPG RFLVAQSGVL ITQVRSVKQM GSRHFVLVDA
GFNDLMRPAM YGSYHHISAL AADGRSLEHA PTVETVVAGP LCESGDVFTQ QEGGNVETRA
LPEVKAGDYL VLHDTGAYGA SMSSNYNSRP LLPEVLFDNG QARLIRRRQT IEELLALELL
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