| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3118 |
|---|
| Symbol | |
|---|
| ID | 5588246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3125113 |
|---|
| End bp | 3125919 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640926760 |
|---|
| Product | ThiF family protein |
|---|
| Protein accession | YP_001464136 |
|---|
| Protein GI | 157158275 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00141325 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTGG TAATTAGTGA TGCATGGCGT CAGCGTTTTG GTGGCACAGC GCGTCTGTAT
GGTGAAAAAG CGTTGCAACT GTTTGCTGAC GCGCATATTT GTGTGGTTGG TATCGGTGGT
GTCGGTTCCT GGGCGGCGGA AGCGCTGGCG CGCACGGGGA TTGGCGCAAT CACGCTTATC
GATATGGATG ATGTGTGCGT CACCAATACC AATCGGCAAA TTCACGCTCT GCGCGATAAC
GTCGGGCTGG CAAAAGCGGA AGTCATGGCG GAGCGTATTC GCCAGATTAA CCCGGAGTGC
CGTGTAACGG TGGTGGATGA TTTCGTGACG CCGGATAACG TAGCGCAGTA TATGAGCGTG
GGTTATTCGT ACGTGATTGA TGCCATTGAT AGTGTACGGC CCAAAGCGGC GCTGATTGCT
TATTGTCGGC GCAATAAAAT CCCGCTGGTC ACGACCGGTG GCGCGGGTGG GCAGATTGAC
CCGACGCAGA TTCAGGTTAC CGATCTGGCG AAAACGATTC AGGATCCGCT GGCGGCGAAG
TTGCGCGAGC GCCTGAAAAG CGATTTTGGC GTAGTGAAAA ACAGTAAAGG TAAGCTCGGC
GTCGATTGCG TGTTTTCTAC TGAAGCGCTG GTGTACCCGC AGTCAGACGG TACTGTGTGT
GCGATGAAAG CCACGGCAGA AGGGCCGAAG CGGATGGATT GTGCATCTGG ATTTGGCGCG
GCAACGATGG TGACCGCCAC CTTTGGGTTT GTTGCGGTTT CTCATGCGCT GAAGAAGATG
ATGGCGAAAG CGGCGCGTCA GGGTTAA
|
|---|
| Protein sequence | MSVVISDAWR QRFGGTARLY GEKALQLFAD AHICVVGIGG VGSWAAEALA RTGIGAITLI
DMDDVCVTNT NRQIHALRDN VGLAKAEVMA ERIRQINPEC RVTVVDDFVT PDNVAQYMSV
GYSYVIDAID SVRPKAALIA YCRRNKIPLV TTGGAGGQID PTQIQVTDLA KTIQDPLAAK
LRERLKSDFG VVKNSKGKLG VDCVFSTEAL VYPQSDGTVC AMKATAEGPK RMDCASGFGA
ATMVTATFGF VAVSHALKKM MAKAARQG
|
|---|
| |