Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2996 |
Symbol | hypF |
ID | 5587796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2995842 |
End bp | 2998094 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640926644 |
Product | carbamoyltransferase HypF |
Protein accession | YP_001464020 |
Protein GI | 157156292 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA ACACATCTTG CGGTGTCCAA CTGCGTATTC GAGGCAAAGT GCAGGGCGTC GGTTTTCGTC CGTTTGTCTG GCAGCTGGCA CAGCAATTAA ATCTTCACGG CGATGTCTGT AATGACGGCG ATGGCGTAGA AGTCCGGCTG CGGGAAGACC CGGAAACGTT TCTTGTTCAA TTGCATCAGC ACTGCCCGCC GCTGGCGCGG ATTGATAGCG TCGAGCGTGA GCCGTACATC TGGTCACAAC TGCCCACTGA GTTCACCATC CGCCAGAGCG CGGGAGGTGC CATGAATACG CAAATTGTCC CGGATGCCGC TACTTGCCCT GCTTGCCTTG CCGAAATGAA TACCCCAGGC GAACGGCGTT ATCGTTATCC GTTTATCAAC TGTACCCACT GCGGCCCGCG TTTCACCATT ATTCGCGCCA TGCCTTACGA CCGCCCGTTT ACCGTGATGG CGGCGTTTCC GTTGTGTCCG GCTTGTGACA AAGAGTACCG CGACCCGCTC GATCGTCGCT TCCACGCCCA GCCGGTGGCC TGCCCGGAGT GTGGCCCGCA TCTTGAATGG GTAAGTCATG GTGAACATGC AGAACAAGAG GCGGCATTAC AGGCGGCTAT CGCACAGTTA AAAATGGGCA ACATTGTCGC CATCAAAGGG ATTGGCGGAT TTCATCTTGC CTGCGATGCA CGTAACAGTA ACGCGGTGGC GACACTTCGG GCGCGCAAAC ATCGCCCGGC GAAACCGCTG GCGGTCATGT TGCCAGTGGC TGACGGTTTA CCAGACGCTG CGCGCCAGTT GCTTACCACG CCCGCCGCGC CGATTGTGCT GGTGGATAAA AAATACGTTC CTGAGCTTTG TGATGATATC GCCCCTGACC TTAACGAAGT CGGGGTAATG TTGCCTGCGA ACCCGCTCCA GCATTTGCTG TTACAGGAAC TGCAATGCCC GCTGGTGATG ACCTCCGGCA ACCTGAGCGG TAAACCACCA GCTATCAGCA ACGAACAGGC GCTGGCGGAT TTGCAGGGCA TTGCCGACGG ATTCTTGATA CATAACCGCG ACATCGTGCA GCGGATGGAT GATTCGGTGG TGCGCGAAAG CGGCGAAATG CTGCGCCGTT CGCGGGGGTA TGTGCCGGAT GCGCTGGCTT TGCCTCCGGG CTTTAAAAAT GTTCCGCCTG TGCTGTGTCT CGGCGCGGAT CTGAAAAATA CCTTCTGCCT GGTGCGCGGT GAACAAGCGG TGTTGAGTCA GCATCTGGGC GATTTAAGTG ACGATGGCAT CCAGATGCAG TGGCGCGAAG CGTTACGCCT GATGCAAAAC ATCTACGATT TTACCCCGCA ATACGTTGTG CATGACGCGC ATCCGGGCTA TGTCTCCAGC CAGTGGGCGC GTGAAATGAA TCTGCCGACG CAAACGGTAC TGCATCATCA TGCCCATGCA GCGGCGTGTC TGGCAGAGCA TCAGTGGCCG CTGGATGGCG GTGATGTCAT TGCTTTGACG CTCGACGGTA TCGGTATGGG GGAGAACGGC GCTTTGTGGG GCGGCGAGTG CCTGCGGGTG AACTATCGCG AATGTGAGCA CCTGGGCGGC TTGCCTGCAG TGGCGCTTCC GGGTGGCGAT TTGGCAGCGA AGCAGCCGTG GCGAAACCTG CTGGCGCAGT GCCTGCGCTT TGTGCCGGAG TGGCAGAATT ACCCTGAAAC AGCAAGTGTG CAACAGCAAA ACTGGAGCGT GCTGGCGCGG GCCATTGAGC GTGGAATTAA CGCGCCGCTG GCGTCATCGT GTGGGCGGTT GTTCGATGCA GTGGCGGCGG CACTGGGCTG TGCGCCAGCC ACGTTAAGTT ATGAAGGTGA AGCGGCTTGT GCTCTGGAGG CGCTCGCAGC CTCATGCCAC GGAGTGACGC ATCCGGTGAC GATGCCGCTG GTGGACAATC AACTGGATCT CGCCACTTTC TGGCAGCAGT GGCTGAACTG GCAGGCACCG GTTAATCAAC GCGCGTGGGC GTTTCATGAT GCGCTGGCGC AGGGTTTTGC CGCGTTGATG CGTGAGCAGG CCACGATGCG TGGTATCACT ACGCTGGTAT TTAGCGGCGG GGTTATTCAT AACCGTTTGC TGCGTGCACG TCTGGCGCAT TATCTCGCTG ATTTCACATT GCTCTTTCCA CAGAGTTTAC CGGCGGGTGA TGGCGGTTTG TCTCTGGGGC AGGGGGTTAT TGCTGCGGCG CGTTGGTTAG CGGGTGAAGT CCAGAACGGA TAA
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Protein sequence | MAKNTSCGVQ LRIRGKVQGV GFRPFVWQLA QQLNLHGDVC NDGDGVEVRL REDPETFLVQ LHQHCPPLAR IDSVEREPYI WSQLPTEFTI RQSAGGAMNT QIVPDAATCP ACLAEMNTPG ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ACDKEYRDPL DRRFHAQPVA CPECGPHLEW VSHGEHAEQE AALQAAIAQL KMGNIVAIKG IGGFHLACDA RNSNAVATLR ARKHRPAKPL AVMLPVADGL PDAARQLLTT PAAPIVLVDK KYVPELCDDI APDLNEVGVM LPANPLQHLL LQELQCPLVM TSGNLSGKPP AISNEQALAD LQGIADGFLI HNRDIVQRMD DSVVRESGEM LRRSRGYVPD ALALPPGFKN VPPVLCLGAD LKNTFCLVRG EQAVLSQHLG DLSDDGIQMQ WREALRLMQN IYDFTPQYVV HDAHPGYVSS QWAREMNLPT QTVLHHHAHA AACLAEHQWP LDGGDVIALT LDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD LAAKQPWRNL LAQCLRFVPE WQNYPETASV QQQNWSVLAR AIERGINAPL ASSCGRLFDA VAAALGCAPA TLSYEGEAAC ALEALAASCH GVTHPVTMPL VDNQLDLATF WQQWLNWQAP VNQRAWAFHD ALAQGFAALM REQATMRGIT TLVFSGGVIH NRLLRARLAH YLADFTLLFP QSLPAGDGGL SLGQGVIAAA RWLAGEVQNG
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