Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2991 |
Symbol | srlR |
ID | 5589228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 2989716 |
End bp | 2990489 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640926639 |
Product | DNA-bindng transcriptional repressor SrlR |
Protein accession | YP_001464015 |
Protein GI | 157159440 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTC GTCAGCGTCA GGCCGCCATT CTGGAGTATC TGCAAAAGCA GGGTAAATGC TCGGTTGAAG AATTGGCGCA ATACTTTGAC ACCACAGGCA CAACCATTCG CAAAGATCTG GTCATTCTGG AACATGCCGG AACCGTCATT CGTACTTATG GCGGAGTGGT GTTGAATAAA GAGGAATCCG ATCCGCCTAT CGATCATAAA ACACTCATCA ACACCCACAA GAAAGAGCTG ATTGCAGAAG CTGCCGTTAG TTTTATCCAT GATGGCGATT CGATCATTCT TGATGCTGGC AGTACCGTTT TGCAGATGGT TCCCCTGCTC TCGCGCTTTA ATAACATCAC GGTGATGACC AACAGCCTGC ATATCGTCAA TGCGCTATCC GAACTGGATA ACGAACAAAC TATCCTGATG CCAGGCGGAA CGTTTCGTAA AAAATCGGCC TCATTTCACG GACAGCTGGC AGAGAATGCC TTCGAACATT TCAGTTTCGA TAAATTGTTT ATGGGCACCG ACGGCATCGA TCTCAATGCG GGCGTAACCA CCTTCAACGA GGTCTATACC GTCAGTAAGG CAATGTGCAA TGCCGCGCGC GAAGTGATTT TAATGGCGGA CTCATCAAAG TTTGGCCGTA AAAGCCCCAA CGTAGTTTGC AGTCTTGAAA GCGTCGATAA GCTGATTACC GACGCAGGTA TCGATCCGGC GTTTCGTCAG GCGCTGGAAG AGAAAGGGAT CGATGTGATC ATAACCGGAG AGAGCAATGA GTGA
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Protein sequence | MKPRQRQAAI LEYLQKQGKC SVEELAQYFD TTGTTIRKDL VILEHAGTVI RTYGGVVLNK EESDPPIDHK TLINTHKKEL IAEAAVSFIH DGDSIILDAG STVLQMVPLL SRFNNITVMT NSLHIVNALS ELDNEQTILM PGGTFRKKSA SFHGQLAENA FEHFSFDKLF MGTDGIDLNA GVTTFNEVYT VSKAMCNAAR EVILMADSSK FGRKSPNVVC SLESVDKLIT DAGIDPAFRQ ALEEKGIDVI ITGESNE
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