Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2858 |
Symbol | rseA |
ID | 5589516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2858556 |
End bp | 2859206 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640926508 |
Product | anti-RNA polymerase sigma factor SigE |
Protein accession | YP_001463895 |
Protein GI | 157156760 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0465052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAG AACAACTTTC CGCTTTAATG GATGGCGAAA CGCTGGATAG TGAGCTGCTT AACGAACTGG CTCATAACCC AGAAATGCAG AAAACCTGGG AAAGCTATCA CTTAATCCGT GACTCAATGC GGGGTGATAC TCCCGAGGTG CTCCATTTCG ATATCTCTTC ACGCGTGATG GCCGCCATTG AAGAAGAGCC AGTACGTCAA CCGGCGACAT TGATCCCGGA AGCCCAGCCT GCGCCGCATC AATGGCAGAA AATGCCATTC TGGCAGAAAG TACGTCCGTG GGCGGCACAG CTTACCCAAA TGGGCGTAGC AGCATGCGTA TCGCTTGCAG TTATCGTTGG CGTCCAGCAC TATAATGGAC AATCTGAAAC GTCCCAGCAG CCCGAAACGC CGGTATTTAA TACACTGCCG ATGATGGGTA AAGCCAGCCC GGTAAGCCTG GGAGTACCTT CTGAAGCGAC CGCAAACAAT GGTCAACAGC AGCAGGTACA GGAGCAGCGT CGTCGCATTA ATGCAATGTT GCAGGATTAC GAACTGCAAC GCCGACTCCA CTCTGAACAG CTTCAGTTTG AGCAGGCGCA AACCCAGCAA GCCGCTGTAC AGGTGCCAGG AATTCAAACT TTAGGAACGC AATCGCAGTA A
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Protein sequence | MQKEQLSALM DGETLDSELL NELAHNPEMQ KTWESYHLIR DSMRGDTPEV LHFDISSRVM AAIEEEPVRQ PATLIPEAQP APHQWQKMPF WQKVRPWAAQ LTQMGVAACV SLAVIVGVQH YNGQSETSQQ PETPVFNTLP MMGKASPVSL GVPSEATANN GQQQQVQEQR RRINAMLQDY ELQRRLHSEQ LQFEQAQTQQ AAVQVPGIQT LGTQSQ
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