Gene EcE24377A_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2480 
Symbolbcr 
ID5588600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2466859 
End bp2468049 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID640926140 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_001463535 
Protein GI157158188 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.138563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCC GACAGCATTC GTCGTTTGCT ATTGTTTTTA TCCTTGGCCT GCTGGCCATG 
TTGATGCCGC TGTCGATTGA TATGTATCTG CCCGCGCTAC CGGTAATTTC AGCGCAGTTT
GGCGTACCTG CGGGCAGTAC GCAGATGACC CTCAGTACTT ATATTCTGGG CTTTGCGTTG
GGGCAGTTAA TCTACGGGCC GATGGCAGAC AGCTTCGGGC GTAAGCCGGT GGTGCTCGGC
GGTACGCTGG TGTTTGCCGC CGCCGCGGTG GCGTGTGCGT TGGCAAACAC CATCGATCAG
CTGATTGTGA TGCGTTTCTT CCACGGGCTG GCTGCGGCTG CGGCCAGCGT GGTCATTAAC
GCCCTGATGC GCGATATTTA CCCGAAAGAA GAGTTCTCGC GGATGATGTC GTTTGTCATG
CTGGTGACCA CTATTGCACC GCTGATGGCA CCGATTGTCG GCGGTTGGGT GCTGGTGTGG
CTGAGCTGGC ATTACATCTT CTGGATCCTG GCATTAGCGG CGATTCTGGC TTCGGCAATG
ATTTTCTTCC TGATTAAAGA AACCTTACCA CCGGAGCGTC GCCAGCCTTT TCACATTCGT
ACCACTATTG GTAACTTTGC GGCGCTGTTC CGTCATAAGC GTGTCCTGAG TTATATGCTT
GCCAGTGGTT TCAGCTTTGC CGGGATGTTC TCGTTCTTAA GCGCCGGACC GTTTGTCTAC
ATTGAAATTA ACCACGTCGC GCCGGAAAAC TTTGGTTATT ACTTTGCACT AAACATTGTT
TTCCTGTTCG TGATGACCAT TTTTAACAGC CGCTTCGTCC GCCGCATTGG CGCGTTAAAT
ATGTTCCGCT CGGGGTTGTG GATACAGTTT ATTATGGCGG CGTGGATGGT CATCAGTGCG
CTGCTGGGGC TGGGATTCTG GTCGCTGGTG GTTGGCGTTG CGGCGTTTGT GGGCTGCGTG
TCGATGGTGT CATCCAATGC GATGGCGGTC ATTCTTGATG AGTTTCCCCA TATGGCGGGA
ACGGCATCTT CGCTGGCAGG AACCTTCCGT TTTGGCATAG GGGCAATTGT TGGCGCATTG
CTTTCTCTTG CGACCTTTAA CTCTGCATGG CCGATGATTT GGTCAATTGC ATTCTGCGCA
ACCAGCTCCA TTCTCTTCTG TCTGTACGCC AGTCGGCCGA AAAAACGGTG A
 
Protein sequence
MTTRQHSSFA IVFILGLLAM LMPLSIDMYL PALPVISAQF GVPAGSTQMT LSTYILGFAL 
GQLIYGPMAD SFGRKPVVLG GTLVFAAAAV ACALANTIDQ LIVMRFFHGL AAAAASVVIN
ALMRDIYPKE EFSRMMSFVM LVTTIAPLMA PIVGGWVLVW LSWHYIFWIL ALAAILASAM
IFFLIKETLP PERRQPFHIR TTIGNFAALF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IEINHVAPEN FGYYFALNIV FLFVMTIFNS RFVRRIGALN MFRSGLWIQF IMAAWMVISA
LLGLGFWSLV VGVAAFVGCV SMVSSNAMAV ILDEFPHMAG TASSLAGTFR FGIGAIVGAL
LSLATFNSAW PMIWSIAFCA TSSILFCLYA SRPKKR