| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2420 |
|---|
| Symbol | |
|---|
| ID | 5588670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2400944 |
|---|
| End bp | 2401861 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640926082 |
|---|
| Product | quaternary amine ABC transporter periplasmic substrate-binding protein |
|---|
| Protein accession | YP_001463477 |
|---|
| Protein GI | 157156757 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCT CAAAGGTCTG GGCAGGTTCA CTGGTTATGT TGGCAGCCGT GAGCCTGCCG
CTACAGGCGG CTTCCCCCGT TAAAGTCGGT TCAAAAATCG ATACCGAAGG CGCGCTACTC
GGCAACATCA TCTTGCAGGT GCTGGAAAGC CACGGCGTAC CGACGGTGAA TAAAGTGCAA
CTCGGAACGA CTCCTGTGGT GCGCGGGGCG ATTACTTCCG GTGAACTGGA TATCTATCCG
GAATATACCG GCAATGGCGC TTTCTTCTTT AAAGATGAAA ACGATGCAGC GTGGAAAAAC
GCGCAGCAAG GTTACGAGAA AGTCAAAAAG CTCGATTCGG AGCACAACAA GTTAATCTGG
CTGACGCCCG CGCCTGCAAA TAACACCTGG ACTATCGCCG TGCGTCAGGA TGTGGCAGAG
AAAAATAAAC TCACTTCGCT TGCCGACCTG AGTCGTTATC TGCAAGAGGG CGGCACCTTC
AAACTGGCAG CCTCGGCAGA GTTTATCGAA CGCGCCGATG CCTTACCCGC GTTTGAAAAA
GCCTACGACT TTAAACTCGA TCAGGATCAG TTGCTGTCAC TGGCTGGCGG CGACACGGCG
GTGACGATTA AAGCCGCTGC CCAGCAAACT TCTGGCGTTA ATGCCGCAAT GGCTTACGGC
ACTGACGGTC CGGTCGCGGC GCTGGGGCTG CAAACCTTAA GCGATCCGCA AGGCGTGCAA
CCTATCTACG CGCCTGCACC AGTGGTGCGT GAGTCGGTGC TGAAAGAGTA TCCGCAAATG
GCACAGTGGC TACAGCCAGT CTTCGCCAGC CTCGATGCAA AAACATTGCA GCAACTGAAT
GCCAGCATTG CAGTTGAAGG ACTGGATGCC AAAAAAGTGG CTGCCGACTA CCTGAAACAA
AAAGGGTGGA CGAAGTAA
|
|---|
| Protein sequence | MPLSKVWAGS LVMLAAVSLP LQAASPVKVG SKIDTEGALL GNIILQVLES HGVPTVNKVQ
LGTTPVVRGA ITSGELDIYP EYTGNGAFFF KDENDAAWKN AQQGYEKVKK LDSEHNKLIW
LTPAPANNTW TIAVRQDVAE KNKLTSLADL SRYLQEGGTF KLAASAEFIE RADALPAFEK
AYDFKLDQDQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAALGL QTLSDPQGVQ
PIYAPAPVVR ESVLKEYPQM AQWLQPVFAS LDAKTLQQLN ASIAVEGLDA KKVAADYLKQ
KGWTK
|
|---|
| |