Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2329 |
Symbol | rfbC |
ID | 5588704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2292512 |
End bp | 2293060 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640925994 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001463389 |
Protein GI | 157158061 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.177999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAA TTAAAACTGA AATTCCAGAC GTACTGATTT TTGAACCGAA AGTTTTTGGT GATGAGCGTG GTTTCTTTTT TGAGAGCTTT AACCAGAAGG TTTTTGAGGA AGCTGTAGGC CGCAAAGTTG AATTTGTCCA GGATAACCAT TCGAAGTCTT GTAAAGGTGT CTTACGCGGA TTGCATTATC AGTTAGAACC TTATGCACAA GGGAAATTGG TGCGCTGCGT TGTTGGTGAA GTTTTTGATG TTGCGGTTGA TATTCGTAAA TCGTCACCAA CTTTTGGCAA ATGGGTTGGG GTGAATTTAT CTGCTGAGAA CAAGCGCCAG TTGTGGATAC CTGAAGGATT TGCACATGGT TTTTTGGTGC TGAGTGAGAC TGCGGAGTTT GTATATAAAA CTACAAATTA TTATCATCCG GAAAGTGATA GAGGGATCCG ATGGGATGAT GAGGAATTAT CTATTACGTG GCCTAGAGGA AATGAACTAA ACTTATCAAA TAAAGATCAG CAACATCCGA GCTTTCAAAA CTGTCAGTGT TTTGAATAA
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Protein sequence | MNVIKTEIPD VLIFEPKVFG DERGFFFESF NQKVFEEAVG RKVEFVQDNH SKSCKGVLRG LHYQLEPYAQ GKLVRCVVGE VFDVAVDIRK SSPTFGKWVG VNLSAENKRQ LWIPEGFAHG FLVLSETAEF VYKTTNYYHP ESDRGIRWDD EELSITWPRG NELNLSNKDQ QHPSFQNCQC FE
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