| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2277 |
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| Symbol | pocR |
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| ID | 5588552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2244644 |
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| End bp | 2245558 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640925943 |
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| Product | regulatory protein PocR |
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| Protein accession | YP_001463338 |
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| Protein GI | 157155157 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4936] Predicted sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000774305 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTCTG CGGCGACACT TAATTCAGAA CTCATTAATA AAATCGCGCA GGATTTTGCG
AAGGCGACCA GCCTTGCGGT TGTCGTGGTC AATATTCACG GCGATGAAAT TTCCGAGCTG
TTTAACTTCA CTCCATTTTG TCAGATGATG CGGCAACACC CTCAGCTAAG CACTCGATGT
CGCATGAGCG ATCGTTGTGG GGGCCTGGAA GCCTCTAAAT CCGATCAGCC TTGTATTTAT
CGCTGTCATG CCGGATTAAC CGATTTCTCT ATTCCACTGG TAATCGCCGG ACATTTAGTC
GGTTTTGTAT TGTGCGGGCA AGTTCGTCTG CGTAATGATG ATGTCGATTT GGTCGATATT
CTGAATGTCG ATGATTGCTG GCAGGCAGAT CCCGAATTAC TTAATGAATT CCGCAAAGTT
CCTGAGATGG ATTACTCAAG AGTTATGGCC TCTGCTGATT TGTTGAAGTT GATTGTGGAA
AATTGCCTCA AAAAACAACT CAATTTTGTG GTTATTAAAG AGAACAAATC TCGGTCAGAT
TCGGTGCGCC AGACTCGTGC GCCTAATCCC CACGACAATA AAATGAAAAA AGCTTTACGC
TATATTGATG CGCATTTATC AGACGATTTG CGTCTGGAAG ATGTCGCCTC GCACGTTTAT
CTAAGTCCTT ATTATTTCAG TAAGTTATTC AAGAAATACC ATGGAATCGG TTTTAATGCG
TGGGTAAACC AACAACGGAT GGCCAGCGCT CGTGAGTTAC TGTGCCATAG TGACTGGAGC
ATCGCCAGCA TTGCGCGTAA TTTAGGTTTT TCGCAAACCA GTTATTTTTG CAAAGTTTTC
CGTCAGACTT ATCAGGTTAC GCCGCAGGTG TATCGACAGC AAGTGAGTGA AAATGCGGCG
ATGGAAACGG TATAG
|
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| Protein sequence | MISAATLNSE LINKIAQDFA KATSLAVVVV NIHGDEISEL FNFTPFCQMM RQHPQLSTRC
RMSDRCGGLE ASKSDQPCIY RCHAGLTDFS IPLVIAGHLV GFVLCGQVRL RNDDVDLVDI
LNVDDCWQAD PELLNEFRKV PEMDYSRVMA SADLLKLIVE NCLKKQLNFV VIKENKSRSD
SVRQTRAPNP HDNKMKKALR YIDAHLSDDL RLEDVASHVY LSPYYFSKLF KKYHGIGFNA
WVNQQRMASA RELLCHSDWS IASIARNLGF SQTSYFCKVF RQTYQVTPQV YRQQVSENAA
METV
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