Gene EcE24377A_2191 details

Gene Information

• Locus tag: EcE24377A_2191
• Symbol: vsr
• ID: 5589436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 2160032
• End bp: 2160502
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640925861
• Product: very short patch repair protein
• Protein accession: YP_001463261
• Protein GI: 157156160
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3727] DNA G:T-mismatch repair endonuclease
• TIGRFAM ID: [TIGR00632] DNA mismatch endonuclease Vsr

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000114608
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACG TTCACGATAA GGCCACTCGC AGCAAAAATA TGCGCGCGAT TGCCACGCGT 
GATACGGCGA TTGAGAAGCG CCTCGCCAGT CTGTTAACCG GGCAGGGCCT GGCGTTTCGC 
GTTCAGGACG CCAGTCTGCC CGGACGTCCG GATTTTGTCG TTGATGAATA TTGTTGCGTG 
ATATTTACCC ACGGCTGCTT CTGGCACCAT CATCACTGCT ATCTGTTTAA AGTGCCTGCG 
ACTCGAACCG AGTTCTGGCT GGAGAAGATA GGTAAAAATG TTGAGCGCGA TCGCCGCGAT 
ATCAGTCGCT TGCAGGAACT CGGCTGGCGC GTATTGATTG TCTGGGAGTG CGCGTTACGT 
GGGCGCGAGA AGCTGACGGA TGAAGCGCTT AGCGAGCGTC TGGAAGAGTG GATCTGCGGC 
GAAGGTGCCA GCGCGCAGAT CGACACGCAG GGGATTCATT TACTCGCTTG A 

 

Protein sequence

MADVHDKATR SKNMRAIATR DTAIEKRLAS LLTGQGLAFR VQDASLPGRP DFVVDEYCCV 
IFTHGCFWHH HHCYLFKVPA TRTEFWLEKI GKNVERDRRD ISRLQELGWR VLIVWECALR 
GREKLTDEAL SERLEEWICG EGASAQIDTQ GIHLLA