Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2162 |
Symbol | amyA |
ID | 5589383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 2133217 |
End bp | 2134704 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640925832 |
Product | cytoplasmic alpha-amylase |
Protein accession | YP_001463232 |
Protein GI | 157155959 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAATC CCACGCTGTT ACAATGTTTT CACTGGTATT ACCCGGAAGG CGGTAAGCTC TGGCCTGAAC TGGCCGAGCG CGCCGACGGT TTTAATGATA TTGGTATCAA TATGGTCTGG TTGCCGCCCG CCTATAAAGG CGCATCGGGC GGGTATTCGG TCGGCTACGA CTCCTATGAT TTATTTGATT TAGGCGAGTT TGATCAGAAA GGCAGCATCC CCACTAAATA TGGCGATAAA GCACAACTGC TGGCCGCCAT TGATGCTCTG AAACGTAATG ACATTGCGGT GCTGTTGGAC GTGGTAGTCA ACCACAAAAT GGGCGCGGAT GAAAAAGAAG CTATTCGCGT GCAGCGTGTA AATGCTGATG ACCGTACGCA AATTGACGAA GAAATCATTG AGTGTGAAGG CTGGACGCGT TACACCTTCC CCGCTCGTGC CGGGCAATAC TCGCAGTTTA TCTGGGATTT CAAATGTTTT AGCGGTATCG ACCATATCGA AAACCCTGAT GAAGATGGCA TATTTAAAAT TGTTAACGAC TACACCGGCG AAGGCTGGAA CGATCAGGTT GATGATGAAT TAGGTAATTT CGATTATCTG ATGGGCGAGA ATATCGATTT CCGCAATCAT GCCGTGACGG AAGAGATTAA ATACTGGGCG CGCTGGGTGA TGGAACAAAC GCAATGCGAC GGTTTTCGTC TTGATGCGGT CAAACATATA CCGGCATGGT TTTATAAAGA GTGGATCGAA CACGTACAAG AAGTTGCGCC AAAGCCGCTG TTTATTGTGG CGGAGTACTG GTCGCATGAA GTTGATAAGC TGCAAACGTA TATTGATCAG GTGGAAGGCA AAACCATGCT GTTTGATGCG CCGCTGCAGA TGAAATTCCA TGAAGCATCG CGCATGGGGC GCGACTACGA CATGACGCAG ATTTTCACGG GTACATTAGT GGAAGCCGAT CCTTTCCACG CCGTGACGCT CGTTGCCAAT CACGACACCC AACCGTTGCA AGCCCTCGAA GCGCCGGTCG AACCGTGGTT TAAACCGCTG GCGTATGCTC TAATTTTGTT GCGGGAAAAT GGCGTTCCTT CGGTGTTCTA TCCGGACCTC TACGGTGCGC ATTACGAAGA TGTCGGTGGT GACGGGCAAA CCTATCCAAT AGATATGCCA ATAATCGAAC AGCTTGATGA GTTAATTCTC GCCCGTCAGC GTTTCGCCCA CGGTGTACAG ACGTTATTTT TCGACCATCC GAACTGCATT GCCTTTAGCC GCAGTGGCAC CGACGAATAT CCCGGCTGCG TGGTGGTCAT GTCGAACGGG GATGATGGCG AAAAAACCAT TCATCTGGGA GAGAATTACG GCAATAAAAC CTGGCGTGAT TTTCTGGGGA ACCGGCAAGA GAGCGTAGTA ACCGACGAAA ACGGCGAAGC GACCTTCTTT TGCAACGGCG GCAGCGTCAG CGTGTGGGTT ATCGAAGAGG TGATTTAA
|
Protein sequence | MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG GYSVGYDSYD LFDLGEFDQK GSIPTKYGDK AQLLAAIDAL KRNDIAVLLD VVVNHKMGAD EKEAIRVQRV NADDRTQIDE EIIECEGWTR YTFPARAGQY SQFIWDFKCF SGIDHIENPD EDGIFKIVND YTGEGWNDQV DDELGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI PAWFYKEWIE HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL ARQRFAHGVQ TLFFDHPNCI AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG ENYGNKTWRD FLGNRQESVV TDENGEATFF CNGGSVSVWV IEEVI
|
| |