| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2049 |
|---|
| Symbol | rrmA |
|---|
| ID | 5589757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2033849 |
|---|
| End bp | 2034658 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640925720 |
|---|
| Product | 23S rRNA methyltransferase A |
|---|
| Protein accession | YP_001463123 |
|---|
| Protein GI | 157157858 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000258454 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTT CCTGTCCACT TTGCCATCAG CCTCTTTCGC GTGAAAAAAA CAGCTATATC
TGTCCCCAAC GACATCAGTT TGATATGGCG AAAGAAGGGT ATGTCAATCT GCTGCCCGTT
CAGCATAAAC GGTCTCGTGA TCCGGGCGAC AGCGCGGAAA TGATGCAAGC ACGCCGCGCA
TTCTTAGATG CCGGACATTA TCAGCCGCTG CGTGATGCAA TTGTCGCCCA ACTGCGGGAA
CGGCTTGATG ATAAGGCCAC GGCGGTGCTG GATATTGGCT GTGGTGAAGG GTATTACACA
CACGTATTTG CCGATGTGTT GCCCGAAATC ACCACGTTTG GCCTGGATGT CTCGAAGGTA
GCGATAAAAG CGGCGGCGAA ACGCTATCCG CAGGTCACTT TTTGTGTCGC TTCCAGCCAC
CGTTTGCCGT TTTCCGATAC CAGTATGGAC GCCATAATAC GTATTTACGC GCCGTGTAAA
GCAGAAGAAT TAGCGCGAGT AGTGAAGCCC GGCGGTTGGG TCATTACTGC CACGCCGGGA
CCGCGACATT TGATGGAGCT GAAGGGGCTG ATTTACAATG AAGTACATCT TCATGCACCT
CATGCAGAAC AACTGGAAGG TTTTACATTA CAGCAGAGTG CTGAGTTGTG TTATCCGATG
CGTCTTCGCG GTGATGAAGC CGTCGCATTA TTGCAGATGA CGCCGTTTGC CTGGCGTGCG
AAGCCAGAAG TCTGGCAAAC ACTGGCAGCA AAAGAAGTGT TCGACTGCCA GACGGACTTT
AATATTCACC TCTGGCAGCG TTCTTATTAA
|
|---|
| Protein sequence | MSFSCPLCHQ PLSREKNSYI CPQRHQFDMA KEGYVNLLPV QHKRSRDPGD SAEMMQARRA
FLDAGHYQPL RDAIVAQLRE RLDDKATAVL DIGCGEGYYT HVFADVLPEI TTFGLDVSKV
AIKAAAKRYP QVTFCVASSH RLPFSDTSMD AIIRIYAPCK AEELARVVKP GGWVITATPG
PRHLMELKGL IYNEVHLHAP HAEQLEGFTL QQSAELCYPM RLRGDEAVAL LQMTPFAWRA
KPEVWQTLAA KEVFDCQTDF NIHLWQRSY
|
|---|
| |