| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2034 |
|---|
| Symbol | |
|---|
| ID | 5586498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2018923 |
|---|
| End bp | 2020833 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640925705 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001463108 |
|---|
| Protein GI | 157157287 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACG ATTTTGCACC AGACGGTCAG CTGGCGAAAG CGATACCAGG CTTTAAGCCG
CGAGAACCAC AGCGACAGAT GGCGGTAGCC GTCACCCAGG CGATAGAAAA AGGCCAGCCG
CTGGTGGTGG AAGCAGGAAC CGGTACGGGC AAAACCTACG CTTACCTGGC TCCTGCGCTG
CGGGCGAAAA AGAAAGTCAT TATCTCGACC GGCTCAAAAG CGTTGCAGGA TCAGCTCTAC
AGCCGCGATT TGCCAACAGT CTCAAAGGCA TTGAAATATA CGGGCAACGT GGCGCTGCTG
AAAGGGCGCT CAAACTACCT CTGCCTCGAA CGTCTCGAAC AGCAGGCGCT GGCGGGGGGC
GATCTGCCGG TACAAATCTT AAGCGATGTG ATCCTGCTGC GCTCCTGGTC TAATCAAACA
GTCGATGGTG ATATCAGCAC CTGCGTCAGC GTGGCGGAAG ATTCACAGGC GTGGCCGCTG
GTCACCAGCA CCAACGACAA CTGTCTTGGC AGCGACTGCC CGATGTATAA AGATTGCTTT
GTGGTCAAAG CACGTAAAAA AGCGATGGAC GCCGATGTGG TGGTGGTAAA CCATCATCTC
TTTCTGGCGG ATATGGTGGT TAAAGAGAGT GGATTTGGCG AACTGATCCC GGAAGCGGAC
GTCATGATCT TCGACGAAGC CCACCAGCTA CCGGACATTG CCAGCCAGTA TTTTGGTCAG
TCACTCTCCA GTCGACAACT GCTCGACCTG GCAAAAGACA TCACCATCGC CTACCGCACC
GAATTAAAAG ACACCCAGCA GTTACAAAAG TGCGCTGATC GTCTTGCCCA GAGTGCGCAG
GATTTTCGTC TGCAACTCGG TGAGCCAGGT TATCGCGGTA ACCTGCGTGA GCTGTTAGCT
AATCCGCAAA TTCAGCGGGC ATTTTTACTG CTCGATGACA CCCTGGAACT TTGTTATGAC
GTGGCGAAAC TGTCACTGGG GCGTTCCGCC TTGCTGGATG CGGCATTTGA GCGCGCTACG
TTGTATCGCA CACGGCTGAA GCGGCTAAAA GAGATCAATC AGCCGGGCTA CAGCTACTGG
TACGAATGCA CTTCGCGCCA TTTTACTCTG GCTCTCACGC CGCTCAGCGT GGCGGATAAA
TTCAAAGAGT TAATGGCGCA AAAGCCTGGT AGCTGGATCT TCACCTCAGC AACGCTGTCG
GTGAACGACG ATCTGCATCA TTTCACCTCG CGGCTTGGGA TAGAACAGGC GGAGTCGTTG
CTATTGCCAA GCCCGTTTGA TTACAGCCGC CAGGCGTTAC TCTGTGTGCC GCGCAATCTG
CCGCAAACCA ACCAGCCAGG TTCTGCTCGC CAGTTAGCGG CAATGCTGCG ACCGATCATC
GAAGCTAACA ACGGTCGTTG TTTTATGCTT TGTACCTCGC ACGCCATGAT GCGTGATCTG
GCCGAGCAGT TCCGCGCTAC CATGACGCTT CCCGTTTTGT TGCAGGGGGA AACCAGCAAA
GGGCAACTGT TGCAGCAATT TGTCAGCGCC GGTAACGCGC TTCTTGTGGC AACCAGTAGT
TTCTGGGAAG GGGTGGACGT GCGTGGCGAT ACATTGTCAT TGGTGATTAT CGACAAGTTG
CCGTTTACCT CGCCGGATGA TCCACTGTTA AAAGCGCGCA TGGAAGATTG TCGTTTGCGC
GGTGGCGACC CGTTCGATGA AGTGCAACTA CCAGATGCCG TCATTACTCT CAAACAGGGG
GTAGGGCGAC TGATTCGCGA CGCCGACGAT CGTGGCGTGC TGGTGATTTG TGACAATCGG
CTGGTGATGC GTCCTTACGG CGCGACGTTT CTCGCCAGTC TGCCGCCCGC GCCACGCACT
CGTGACATTG CCCGTGCGGT TCGTTTCCTT GCGATACCAT CCTCCAGGTA A
|
|---|
| Protein sequence | MTDDFAPDGQ LAKAIPGFKP REPQRQMAVA VTQAIEKGQP LVVEAGTGTG KTYAYLAPAL
RAKKKVIIST GSKALQDQLY SRDLPTVSKA LKYTGNVALL KGRSNYLCLE RLEQQALAGG
DLPVQILSDV ILLRSWSNQT VDGDISTCVS VAEDSQAWPL VTSTNDNCLG SDCPMYKDCF
VVKARKKAMD ADVVVVNHHL FLADMVVKES GFGELIPEAD VMIFDEAHQL PDIASQYFGQ
SLSSRQLLDL AKDITIAYRT ELKDTQQLQK CADRLAQSAQ DFRLQLGEPG YRGNLRELLA
NPQIQRAFLL LDDTLELCYD VAKLSLGRSA LLDAAFERAT LYRTRLKRLK EINQPGYSYW
YECTSRHFTL ALTPLSVADK FKELMAQKPG SWIFTSATLS VNDDLHHFTS RLGIEQAESL
LLPSPFDYSR QALLCVPRNL PQTNQPGSAR QLAAMLRPII EANNGRCFML CTSHAMMRDL
AEQFRATMTL PVLLQGETSK GQLLQQFVSA GNALLVATSS FWEGVDVRGD TLSLVIIDKL
PFTSPDDPLL KARMEDCRLR GGDPFDEVQL PDAVITLKQG VGRLIRDADD RGVLVICDNR
LVMRPYGATF LASLPPAPRT RDIARAVRFL AIPSSR
|
|---|
| |