Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2003 |
Symbol | gapA |
ID | 5590753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1988393 |
End bp | 1989388 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640925675 |
Product | giyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
Protein accession | YP_001463078 |
Protein GI | 157156808 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0286185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATCA AAGTAGGTAT CAACGGTTTT GGCCGTATCG GTCGCATTGT TTTCCGTGCT GCTCAGAAAC GTTCTGACAT CGAGATCGTT GCAATCAACG ACCTGTTAGA CGCTGATTAC ATGGCATACA TGCTGAAATA TGACTCCACT CACGGCCGTT TCGACGGTAC CGTTGAAGTG AAAGACGGTC ATCTGATCGT TAACGGTAAA AAAATCCGTG TTACCGCTGA ACGTGATCCG GCTAACCTGA AATGGGACGA AGTTGGTGTT GACGTTGTCG CTGAAGCAAC TGGTCTGTTC CTGACTGACG AAACTGCTCG TAAACACATC ACCGCTGGTG CGAAGAAAGT GGTTATGACT GGTCCGTCTA AAGACAACAC TCCGATGTTC GTTAAAGGCG CTAACTTCGA CAAATATGCT GGCCAGGACA TCGTTTCCAA CGCTTCCTGC ACCACCAACT GCCTGGCTCC GCTGGCTAAA GTTATCAACG ATAACTTCGG CATCATCGAA GGTCTGATGA CCACCGTTCA TGCTACTACC GCTACTCAGA AAACTGTTGA TGGCCCGTCT CACAAAGACT GGCGCGGCGG CCGCGGCGCT TCCCAGAACA TCATCCCGTC CTCTACCGGT GCTGCTAAAG CTGTAGGTAA AGTACTGCCA GAACTGAATG GCAAACTGAC TGGTATGGCG TTCCGCGTTC CGACCCCGAA CGTATCCGTA GTTGACCTGA CCGTTCGTCT GGAAAAAGCT GCAACTTACG AGCAGATCAA AGCTGCCGTT AAAGCTGCTG CTGAAGGCGA AATGAAAGGC GTTCTGGGCT ACACCGAAGA TGACGTAGTA TCTACCGATT TCAACGGCGA AGTTTGCACT TCCGTGTTCG ATGCTAAAGC TGGTATCGCT CTGAACGACA ACTTCGTGAA ACTGGTATCC TGGTACGACA ACGAAACCGG TTACTCCAAC AAAGTTCTGG ACCTGATCGC TCACATCTCC AAATAA
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Protein sequence | MTIKVGINGF GRIGRIVFRA AQKRSDIEIV AINDLLDADY MAYMLKYDST HGRFDGTVEV KDGHLIVNGK KIRVTAERDP ANLKWDEVGV DVVAEATGLF LTDETARKHI TAGAKKVVMT GPSKDNTPMF VKGANFDKYA GQDIVSNASC TTNCLAPLAK VINDNFGIIE GLMTTVHATT ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVLP ELNGKLTGMA FRVPTPNVSV VDLTVRLEKA ATYEQIKAAV KAAAEGEMKG VLGYTEDDVV STDFNGEVCT SVFDAKAGIA LNDNFVKLVS WYDNETGYSN KVLDLIAHIS K
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