Gene EcE24377A_1754 details

Gene Information

• Locus tag: EcE24377A_1754
• Symbol: pinR
• ID: 5588206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 1754336
• End bp: 1754926
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640925432
• Product: site-specific recombinase resolvase family protein PinR
• Protein accession: YP_001462837
• Protein GI: 157159297
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1961] Site-specific recombinases, DNA invertase Pin homologs

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0427296
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGAA TTTTTGCTTA CTGTCGGATA TCAACGCTGG ATCAGACCAC CGAAAATCAA 
CGCCGGGAAA TCGAAAGTGC AGGTTTTAAA ATCAAACCTC AGCAAATAAT CGAAGAACAC 
ATTAGCGGCT CAGCAGCAAC CAGTGAGCGT CCTAGTTTTA ACCGGTTGCT TGCTCGCCTG 
AAATGTGGTG ATCAATTGAT TGTGACAAAA CTGGATCGCC TTGGTTGTAA TGCAATGGAT 
ATCAGGAAAA CAGTGGAACA ACTGACCGAA ACAGGTATCA GAGTGCATTG CTTAGCATTG 
GGGGGCATTG ACCTGACCAG TCCAACAGGA AAAATGATGA TGCAAGTAAT TTCAGCAGTC 
GCTGAATTTG AACGAGACCT TTTACTTGAA CGCACTCATT CCGGGATAGT AAGAGCCCGG 
GGCGCAGGGA AACGTTTTGG TCGACCACCT GTGTTAAATG AAGAACAGAA ACAGGTGGTA 
TTCGAACGAA TTAAGTCAGG TGTAAGTATA AGTGCCATTG CCCGGGAATT CAAAACCTCG 
CGGCAAACCA TTTTAAGAGC CAAAGCAAAA CTTCAGACAC CTGACATATA A 

 

Protein sequence

MSRIFAYCRI STLDQTTENQ RREIESAGFK IKPQQIIEEH ISGSAATSER PSFNRLLARL 
KCGDQLIVTK LDRLGCNAMD IRKTVEQLTE TGIRVHCLAL GGIDLTSPTG KMMMQVISAV 
AEFERDLLLE RTHSGIVRAR GAGKRFGRPP VLNEEQKQVV FERIKSGVSI SAIAREFKTS 
RQTILRAKAK LQTPDI