| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1714 |
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| Symbol | lsrA |
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| ID | 5589425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 1717664 |
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| End bp | 1718665 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640925395 |
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| Product | autoinducer-2 ABC transporter, ATP-binding protein LsrA |
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| Protein accession | YP_001462800 |
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| Protein GI | 157158708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGA GTGATACCCG CGCGTTACCG CTACTTTGCG CCCGCTCGGT TTATAAACAG
TATTCAGGGG TCAATGTCCT GAAAGGCATC GATTTTACGT TGCATCAGGG GGAGGTCCAC
GCCCTGCTCG GCGGCAATGG TGCCGGTAAA TCGACGTTAA TGAAGATTAT TGCCGGTATT
ACCCCTGCTG ATAGCGGTAC GCTGGAGATT GGGGGCAACA ACTACGCCAG ATTAACGCCA
GTTCATGCTC ATCAGCTGGG CATTTATCTC GTTCCCCAGG AACCGCTGCT TTTCCCAAGC
CTGTCGATAA AAGAAAACAT CCTGTTTGGG ATGGCAAAAA AACAGCTCTC CATGCAAAAA
ATGAAGAACT TGCTGGCGGC GCTGGGCTGC CAGTTTGATC TGCATAGTCT GGCAGGATCG
CTGGATGTCG CCGATCGCCA AATGGTGGAA ATCCTCCGCG GGCTAATGCG CGACTCGCGG
ATTCTGATCC TCGATGAACC TACCGCCTCG CTTACCCCTG CGGAAACCGA ACGCTTGTTT
ACTCGCTTGC AAGAGCTGCT TGCTACTGGC GTGGGTATTG TTTTTATCTC GCATAAGCTG
CCGGAAATTC GCCAGATTGC CGATCGAATT AGCGTGATGC GCGACGGAAC CATCGCCTTA
AGCGGCAAAA CCAGCGAACT GTCTACCGAC GACATTATTC AGGCCATCAC GCCAGTGGTA
CGGGAAAAAT CGCTCTCTGC CAGCCAAAAA TTATGGCTGG AGTTACCTGG TAACCGCCCA
CAACATGCTG CCGGAACGCC GGTGCTGACA CTGGAAAATC TGACCGGCGA AGGTTTCAGG
AATGTCAGCA TGACGCTCAA TGCCGGAGAA ATTCTGGGCC TGGCTGGGCT GGTGGGGGCC
GGACGCACAG AACTGGCCGA GACGCTCTAT GGTCTGCGTA CTTTGCGTGG CTTTATAGCG
CGATTCCAGT TAACCGCACC TTATGTGCGC TCTATGCCAT GA
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| Protein sequence | MQTSDTRALP LLCARSVYKQ YSGVNVLKGI DFTLHQGEVH ALLGGNGAGK STLMKIIAGI
TPADSGTLEI GGNNYARLTP VHAHQLGIYL VPQEPLLFPS LSIKENILFG MAKKQLSMQK
MKNLLAALGC QFDLHSLAGS LDVADRQMVE ILRGLMRDSR ILILDEPTAS LTPAETERLF
TRLQELLATG VGIVFISHKL PEIRQIADRI SVMRDGTIAL SGKTSELSTD DIIQAITPVV
REKSLSASQK LWLELPGNRP QHAAGTPVLT LENLTGEGFR NVSMTLNAGE ILGLAGLVGA
GRTELAETLY GLRTLRGFIA RFQLTAPYVR SMP
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