| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1594 |
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| Symbol | hrpA |
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| ID | 5589871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 1583032 |
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| End bp | 1586934 |
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| Gene Length | 3903 bp |
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| Protein Length | 1300 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640925283 |
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| Product | ATP-dependent RNA helicase HrpA |
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| Protein accession | YP_001462688 |
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| Protein GI | 157157344 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAC AACAAAAATT GACCTTTACG GCCTTGCAGC AGCGGCTGGA TTCGCTGATG
CTGCGCGACA GACTGCGTTT TTCTCGGCGT CTGCACGGTG TTAAGAAGGT TAAAAATCCT
GATGCACAAC AGGCCATTTT CCAGGAGATG GCGAAAGAGA TTGACCAGGC GGCAGGGAAA
GTCCTGCTGC GTGAAGCGGC ACGACCGGAA ATTACTTATC CTGACAATTT ACCGGTTAGT
CAGAAAAAAC AGGACATTCT CGAAGCGATT CGTGATCACC AGGTGGTGAT CGTCGCCGGG
GAAACGGGTT CTGGTAAAAC GACTCAGTTA CCGAAAATCT GTATGGAGCT GGGGCGCGGG
ATTAAAGGGC TGATCGGCCA TACCCAGCCG CGTCGCCTGG CGGCAAGAAC GGTGGCGAAC
CGTATTGCGG AAGAGCTGAA AACGGAGCCG GGCGGTTGCA TCGGTTACAA AGTGCGTTTC
AGCGATCACG TTAGTGATAA CACGATGGTC AAGCTGATGA CCGACGGTAT CCTGCTGGCG
GAGATCCAGC AAGACCGCCT GCTGATGCAG TACGACACCA TCATTATTGA CGAAGCACAC
GAACGCAGCC TGAATATCGA TTTTCTGCTC GGCTATTTGA AAGAGTTGCT GCCGCGGCGT
CCTGACCTAA AAATCATTAT CACTTCCGCG ACTATCGACC CGGAACGCTT TTCGCGCCAC
TTTAATAATG CGCCGATTAT CGAAGTCTCC GGTCGGACCT ATCCGGTGGA AGTGCGCTAT
CGACCGATTG TTGAAGAAGC CGACGACACC GAGCGCGATC AGTTGCAGGC GATTTTTGAC
GCCGTAGACG AACTGAGTCA GGAAAGCCCT GGCGACATTC TGATCTTTAT GAGTGGTGAG
CGGGAAATTC GCGATACCGC CGATGCGCTG AACAAGCTAA ATCTGCGTCA TACCGAAATC
TTGCCGCTTT ATGCGCGGCT TTCGAACAGC GAACAGAACC GCGTGTTCCA GTCGCACAGC
GGACGGCGCA TTGTGCTGGC GACCAACGTC GCGGAAACCT CGCTGACCGT ACCGGGGATT
AAATACGTTA TCGATCCCGG TACAGCACGT ATCAGCCGCT ACAGCTATCG CACCAAAGTG
CAGCGTTTGC CGATTGAACC CATTTCGCAG GCGTCTGCCA ATCAGCGTAA AGGCCGCTGT
GGGCGTGTGT CCGAAGGGAT CTGTATTCGT CTCTATTCCG AAGACGATTT CCTTTCGCGC
CCGGAGTTTA CCGATCCGGA GATTCTGCGT ACCAACCTGG CCTCGGTTAT TTTGCAGATG
ACCGCGCTGG GGCTGGGCGA TATCGCTGCG TTCCCGTTTG TCGAAGCACC GGATAAACGC
AATATCCAGG ATGGCGTGCG TCTGCTCGAA GAACTGGGCG CGATCACCAC GGATGAACAG
GCCAGCGCCT ATAAACTGAC GCCGCTCGGT CGCCAGCTCT CGCAGTTGCC TGTCGATCCA
CGTCTGGCGC GTATGGTGCT GGAAGCGCAA AAACATGGCT GCGTGCGTGA GGCGATGATT
ATCACGTCCG CGCTTTCCAT TCAGGATCCG CGCGAGCGTC CGATGGATAA ACAGCAGGCA
TCGGACGAAA AACATCGTCG CTTCCACGAC AAAGAGTCTG ACCTCCTCGC GTTTGTGAAT
CTGTGGAATT ATCTTGGCGA GCAGCAAAAG GCGCTTTCTT CCAACGCCTT CCGTCGCCTG
TGTCGTACCG ATTATCTCAA CTATCTGCGC GTGCGCGAAT GGCAGGATAT CTACACCCAG
TTGCGCCAGG TGGTGAAAGA ACTTGGCATT CCGGTTAACA GCGAACCGGC GGAGTATCGC
GAAATTCACA TTGCGTTGCT GACGGGTTTA CTTTCCCATA TCGGCATGAA AGATGCCGAT
AAACAAGAAT ATACCGGCGC ACGTAACGCG CGTTTCTCCA TCTTTCCCGG TTCTGGTTTA
TTCAAAAAAC CGCCGAAATG GGTAATGGTG GCGGAACTGG TAGAAACCAG CCGCCTGTGG
GGGCGCATTG CTGCGCGTAT CGACCCGGAA TGGGTGGAGC CTGTCGCTCA GCATTTGATT
AAACGCACCT ACAGCGAACC TCACTGGGAA CGGGCGCAGG GCGCGGTGAT GGCAACGGAA
AAAGTCACTG TTTATGGTTT GCCGATTGTT GCCGCGCGCA AGGTCAACTA CAGCCAGATC
GATCCGGCGT TATGCCGTGA ACTCTTTATT CGCCATGCGC TGGTGGAAGG TGACTGGCAG
ACGCGTCACG CATTCTTCCG TGAAAACCTG AAACTGCGGG CCGAAGTGGA AGAGCTGGAA
CACAAATCAC GTCGCCGCGA TATTCTGGTT GATGACGAAA CGTTGTTTGA GTTCTACGAC
CAGCGCATCA GCCACGATGT GATCTCTGCA CGCCACTTCG ACAGCTGGTG GAAAAAAGTC
AGCCGCGAAA CCCCTGATTT GCTCAACTTT GAAAAAAGCA TGTTGATCAA AGAGGGCGCA
GAAAAAATCA GCAAGCTGGA TTACCCGAAC TTCTGGCATC AGGGCAATCT CAAGCTGCGT
TTGAGCTATC AGTTTGAGCC CGGCGCGGAT GCTGACGGTG TGACCGTACA TATTCCGCTG
CCGTTACTTA ACCAGGTTGA GGAAAGCGGG TTTGAATGGC AGATCCCCGG TCTGCGCCGC
GAACTGGTGA TTGCTCTGAT TAAATCGTTG CCGAAACCGG TACGCCGTAA TTTTGTACCC
GCACCAAACT ACGCCGAAGC GTTTTTAGGC CGCGTCACAC CGCTGGAGTT ACCGTTGCTC
GACAGCCTTG AGCGCGAGTT ACGGCGGATG ACCGGTGTTA CCGTTGACCG CGAAGACTGG
CACTGGGATC AGGTGCCCGA TCACCTGAAA ATCACCTTCC GCGTGGTGGA CGACAAAAAT
AAGAAGCTAA AAGAAGGGCG CTCATTACAG GATCTGAAAG ATGCGCTGAA AGGCAAAGTG
CAGGAAACGC TGTCCGCGGT GGCGGATGAC GGTATCGAGC AGAGCGGGCT GCATATCTGG
AGCTTTGGGC AACTGCCGGA AAGCTACGAA CAGAAGCGCG GCAACTATAA AGTGAAGGCG
TGGCCGGCGC TGGTGGATGA ACGTGACAGT GTGGCGATCA AACTGTTTGA TAACCCGCTG
GAGCAAAAAC AGGCAATGTG GAACGGTCTT CGCCGTCTAC TGCTGCTAAA TATTCCCTCG
CCGATCAAGT ATTTACATGA GAAGTTACCA AACAAAGCCA AGCTTGGACT GTACTTTAAC
CCGTATGGCA AAGTGCTGGA GCTGATCGAC GACTGTATCT CCTGCGGTGT GGATCAACTG
ATCGACGCCA ATGGTGGCCC GGTCTGGACG GAAGAAGGCT TTGCTGCGCT GCATGAGAAA
GTGCGTGCCG AACTGAACGA CACGGTGGTA GATATTGCGA AGCAGGTCGA GCAAATTCTT
ACGGCAGTGT TCAATATCAA CAAACGTCTG AAAGGGCGGG TGGATATGAC CATGGCACTG
GGGCTTTCTG ACATTAAAGC GCAGATGGGC GGGTTGGTAT ATCGCGGTTT TGTCACTGGT
AACGGCTTCA AACGGCTGGG CGACACGCTG CGATATTTGC AGGCGATTGA AAAACGGCTG
GAAAAACTGG CGGTTGATCC ACATCGCGAC CGTGCTCAGA TGCTGAAAGT CGAAAACGTC
CAGCAGGCGT GGCAGCAATG GATCAACAAA CTGCCGCCTG CACGTCGTGA GGATGAAGAC
GTGAAAGAGA TCCGTTGGAT GATAGAAGAG TTGCGCGTTA GTTACTTCGC TCAACAACTT
GGTACGCCTT ATCCGATTTC AGATAAGCGT ATTTTGCAGG CGATGGAGCA GATTAGCGGT
TAA
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| Protein sequence | MTEQQKLTFT ALQQRLDSLM LRDRLRFSRR LHGVKKVKNP DAQQAIFQEM AKEIDQAAGK
VLLREAARPE ITYPDNLPVS QKKQDILEAI RDHQVVIVAG ETGSGKTTQL PKICMELGRG
IKGLIGHTQP RRLAARTVAN RIAEELKTEP GGCIGYKVRF SDHVSDNTMV KLMTDGILLA
EIQQDRLLMQ YDTIIIDEAH ERSLNIDFLL GYLKELLPRR PDLKIIITSA TIDPERFSRH
FNNAPIIEVS GRTYPVEVRY RPIVEEADDT ERDQLQAIFD AVDELSQESP GDILIFMSGE
REIRDTADAL NKLNLRHTEI LPLYARLSNS EQNRVFQSHS GRRIVLATNV AETSLTVPGI
KYVIDPGTAR ISRYSYRTKV QRLPIEPISQ ASANQRKGRC GRVSEGICIR LYSEDDFLSR
PEFTDPEILR TNLASVILQM TALGLGDIAA FPFVEAPDKR NIQDGVRLLE ELGAITTDEQ
ASAYKLTPLG RQLSQLPVDP RLARMVLEAQ KHGCVREAMI ITSALSIQDP RERPMDKQQA
SDEKHRRFHD KESDLLAFVN LWNYLGEQQK ALSSNAFRRL CRTDYLNYLR VREWQDIYTQ
LRQVVKELGI PVNSEPAEYR EIHIALLTGL LSHIGMKDAD KQEYTGARNA RFSIFPGSGL
FKKPPKWVMV AELVETSRLW GRIAARIDPE WVEPVAQHLI KRTYSEPHWE RAQGAVMATE
KVTVYGLPIV AARKVNYSQI DPALCRELFI RHALVEGDWQ TRHAFFRENL KLRAEVEELE
HKSRRRDILV DDETLFEFYD QRISHDVISA RHFDSWWKKV SRETPDLLNF EKSMLIKEGA
EKISKLDYPN FWHQGNLKLR LSYQFEPGAD ADGVTVHIPL PLLNQVEESG FEWQIPGLRR
ELVIALIKSL PKPVRRNFVP APNYAEAFLG RVTPLELPLL DSLERELRRM TGVTVDREDW
HWDQVPDHLK ITFRVVDDKN KKLKEGRSLQ DLKDALKGKV QETLSAVADD GIEQSGLHIW
SFGQLPESYE QKRGNYKVKA WPALVDERDS VAIKLFDNPL EQKQAMWNGL RRLLLLNIPS
PIKYLHEKLP NKAKLGLYFN PYGKVLELID DCISCGVDQL IDANGGPVWT EEGFAALHEK
VRAELNDTVV DIAKQVEQIL TAVFNINKRL KGRVDMTMAL GLSDIKAQMG GLVYRGFVTG
NGFKRLGDTL RYLQAIEKRL EKLAVDPHRD RAQMLKVENV QQAWQQWINK LPPARREDED
VKEIRWMIEE LRVSYFAQQL GTPYPISDKR ILQAMEQISG
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