Gene EcE24377A_1581 details

Gene Information

• Locus tag: EcE24377A_1581
• Symbol: paaD
• ID: 5590222
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 1569372
• End bp: 1569794
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640925271
• Product: phenylacetic acid degradation protein PaaD
• Protein accession: YP_001462676
• Protein GI: 157154918
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1; [TIGR02286] phenylacetic acid degradation protein PaaD

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCATA AGGCCTGGCA AAATGCCCAT GCAATGTATG AGAACGATGC CTGCGCCAAA 
GCGCTTGGCA TCGACATTAT CTCAATGGAT GAAGGCTTTG CTGTAGTGAC CATGACCGTC 
ACTGCACAAA TGCTTAACGG TCATCAAAGT TGCCACGGCG GGCAGCTATT TTCACTGGCT 
GATACTGCCT TTGCCTACGC CTGCAATAGC CAGGGGCTGG CAGCCGTCGC TTCTGCCTGC 
ACGATTGATT TTTTGCGTCC AGGCTTTGCC GGAGACACCT TAACTGCTAC TGCGCAGGTA 
CGTCATCAGG GCAAGCAAAC CGGTGTTTAC GACATCGAAA TTGTTAACCA ACAACAAAAA 
ACGGTTGCGC TGTTTCGCGG TAAATCTCAC CGCATCGGCG GCACCATTAC AGGAGAAGCC 
TGA 

 

Protein sequence

MSHKAWQNAH AMYENDACAK ALGIDIISMD EGFAVVTMTV TAQMLNGHQS CHGGQLFSLA 
DTAFAYACNS QGLAAVASAC TIDFLRPGFA GDTLTATAQV RHQGKQTGVY DIEIVNQQQK 
TVALFRGKSH RIGGTITGEA