| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1555 |
|---|
| Symbol | |
|---|
| ID | 5589041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1538525 |
|---|
| End bp | 1539817 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640925245 |
|---|
| Product | sensory box-containing diguanylate cyclase |
|---|
| Protein accession | YP_001462650 |
|---|
| Protein GI | 157155005 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATGGC TTTTTTGCGA TCGGATAGCA ACAAAAATTG ATAAAAATAA CGGGATCTCA
ATGATTACGC ACAACTTCAA TACCCTGGAC TTACTCACCA GTCCTGTCTG GATCGTTTCG
CCCTTTGAGG AACAGTTAAT TTATGCCAAT AGCGCGGCGC GACTGTTGAT GCAAGACCTC
ACGTTTAGTC AGCTACGAAC CGGTCCCTAT TCCGTCTCCT CACAAAAAGA ACTGCCGAAA
TACCTCTCCG ATCTGCAAAA CCAACACGAT ATTATCGAAA TCCTCACTGT TCAGCGTAAA
GAAGAGGAAA CAGCATTAAG CTGTCGGCTT GTTTTGCGAA AGCTGACAGA AGCAGAACCG
GTGATTATTT TCGAAGGTAT CGAAGCGCCG GCAACGCTGG GTTTAAAAGC CAGTCGCTCG
GCAAATTATC AGCGCAAAAA ACAAGGTTTT TATGCGCGCT TTTTTCTGAC TAACTCTGCA
CCAATGTTGT TGATTGACCC CTCACGAGAT GGCCAAATCG TCGATGCTAA CCTCGCCGCG
CTCAATTTCT ATGGTTATAA CCATGAAACG ATGTGCCAGA AACATACCTG GGAAATTAAT
ATGCTCGGGC GTCGCGTCAT GCCTATCATG CATGAAATTT CGCATTTACC CGGCGGTCAT
AAACCTTTGA ATTTTGTTCA TAAACTGGCG GATGGATCTA CTCGTCATGT GCAGACCTAT
GCCGGGCCGA TTGAAATTTA TGGCGACAAG CTCATGTTAT GTATTGTGCA TGATATTACT
GAGCAAAAAC GGCTGGAGGA GCAGCTGGAA CATGCTGCTC ACCATGACGC GATGACCGGA
TTACTGAATC GGCGACAGTT TTATCACATT ACGGAACCAG GCCAAATGCA GCACCTCGCC
ATCGCCCAGG ATTACAGCTT GTTGCTCATC GACACCGATC GTTTTAAACA CATTAACGAT
CTCTATGGGC ATTCTAAAGG TGATGAGGTG TTATGCGCCC TCGCCCGCAC CCTTGAAAGT
TGCGCTCGCA AAGGCGATTT GGTGTTTCGT TGGGGAGGCG AAGAGTTTGT CTTATTGCTA
CCAAGAACCC CACTGGATAC CGCGCTTTCG CTGGCTGAAA CTATCCGTGT AAGCGTGGCA
AAAGTGAGTA TTTCGGGCTT ACCACGCTTT ACCGTCAGCA TTGGTGTGGC GCATCACGAA
GGAAATGAAA GCATCGATGA ACTGTTTAAA CGCGTTGATG ATGCTTTGTA TCGGGCGAAA
AATGATGGAC GCAACCGCGT GCTGGCGGCA TAA
|
|---|
| Protein sequence | MTWLFCDRIA TKIDKNNGIS MITHNFNTLD LLTSPVWIVS PFEEQLIYAN SAARLLMQDL
TFSQLRTGPY SVSSQKELPK YLSDLQNQHD IIEILTVQRK EEETALSCRL VLRKLTEAEP
VIIFEGIEAP ATLGLKASRS ANYQRKKQGF YARFFLTNSA PMLLIDPSRD GQIVDANLAA
LNFYGYNHET MCQKHTWEIN MLGRRVMPIM HEISHLPGGH KPLNFVHKLA DGSTRHVQTY
AGPIEIYGDK LMLCIVHDIT EQKRLEEQLE HAAHHDAMTG LLNRRQFYHI TEPGQMQHLA
IAQDYSLLLI DTDRFKHIND LYGHSKGDEV LCALARTLES CARKGDLVFR WGGEEFVLLL
PRTPLDTALS LAETIRVSVA KVSISGLPRF TVSIGVAHHE GNESIDELFK RVDDALYRAK
NDGRNRVLAA
|
|---|
| |