Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1484 |
Symbol | pyrF |
ID | 5588363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1473649 |
End bp | 1474386 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640925176 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001462581 |
Protein GI | 157158650 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000370783 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAA CTGCTTCATC TTCTTCCCGC GCTGTTACGA ATTCTCCTGT GGTTGTTGCC CTTGATTATC ATAATCGTGA TGACGCGCTG TCCTTTGTCG ACAAGATCGA CCCACGCGAT TGTCGTCTGA AGGTCGGCAA AGAGATGTTT ACATTGTTTG GGCCACAGTT TGTGCGCGAA CTTCAACAGC GTGGTTTTGA TATCTTTCTT GACCTGAAAT TCCACGATAT TCCTAACACT GCTGCGCACG CTGTCGCTGC TGCAGCTGAC TTAGGCGTGT GGATGGTGAA TGTTCATGCC TCTGGTGGGG CGCGTATGAT GACCGCAGCG CGTGAGGCAC TGGTTCCGTT TGGCAAAGAT GCACCGCTTT TGATTGCTGT GACAGTGTTG ACCAGCATGG AAGCTAGCGA CCTGGCCGAT CTTGGCGTGA CACTGTCACC TGCAGATTAT GCAGAACGTC TGGCGGCACT GACGCAAAAA TGTGGCCTTG ATGGTGTGGT GTGTTCTGCT CAGGAAGCTG TGCGCTTTAA ACAGGTATTC GGTCAGGAGT TCAAACTGGT TACACCGGGC ATTCGTCCGC AGGGGAGTGA TGCTGGTGAC CAGCGCCGCA TTATGACGCC AGAACAGGCG TTGGCGGCTG GTGTTGATTA TATGGTGATT GGTCGCCCGG TAACGCAATC GGTAGATCCA GCGCAGACGC TGAAAGCGAT CAACGCCTCT TTACAGCGGA GTGCATGA
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Protein sequence | MTLTASSSSR AVTNSPVVVA LDYHNRDDAL SFVDKIDPRD CRLKVGKEMF TLFGPQFVRE LQQRGFDIFL DLKFHDIPNT AAHAVAAAAD LGVWMVNVHA SGGARMMTAA REALVPFGKD APLLIAVTVL TSMEASDLAD LGVTLSPADY AERLAALTQK CGLDGVVCSA QEAVRFKQVF GQEFKLVTPG IRPQGSDAGD QRRIMTPEQA LAAGVDYMVI GRPVTQSVDP AQTLKAINAS LQRSA
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