| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1363 |
|---|
| Symbol | kdsA |
|---|
| ID | 5586581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 1358937 |
|---|
| End bp | 1359791 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640925059 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001462468 |
|---|
| Protein GI | 157158072 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0134407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA AAGTGGTTAG CATTGGCGAC ATCAACGTAG CAAATGACCT GCCGTTCGTA
CTGTTTGGCG GTATGAACGT GCTGGAATCT CGCGATCTGG CGATGCGCAT TTGCGAGCAC
TACGTAACTG TGACCCAGAA ACTGGGTATC CCTTACGTGT TCAAAGCCTC TTTTGACAAA
GCCAACCGCT CCTCCATCCA CTCTTATCGT GGACCGGGCC TGGAAGAAGG GATGAAAATC
TTCCAGGAGT TGAAGCAGAC TTTTGGCGTG AAAATTATCA CCGACGTTCA CGAACCAAGT
CAGGCACAGC CCGTTGCTGA TGTCGTGGAT GTGATTCAGT TGCCGGCGTT TCTTGCTCGC
CAGACTGACC TGGTTGAAGC CATGGCGAAA ACCGGTGCGG TAATTAACGT CAAGAAACCA
CAGTTTGTCA GCCCGGGACA GATGGGTAAT ATCGTTGATA AATTCAAAGA AGGCGGCAAC
GAAAAAGTGA TTCTTTGCGA TCGTGGTGCT AACTTCGGCT ATGACAACCT GGTTGTCGAT
ATGCTGGGCT TCAGCATTAT GAAGAAAGTG TCTGGTAACT CGCCGGTGAT TTTCGACGTG
ACCCACGCAC TGCAATGCCG CGATCCGTTT GGCGCAGCTT CCGGTGGTCG TCGTGCTCAG
GTGGCTGAGC TGGCACGAGC CGGTATGGCG GTAGGTCTGG CGGGGCTGTT TATTGAAGCG
CATCCGGATC CGGAACATGC GAAATGTGAT GGTCCATCCG CGCTGCCGCT GGCTAAACTG
GAACCGTTCC TCAAGCAGAT GAAAGCGATT GATGATCTGG TGAAAGGTTT CGAAGAACTG
GATACCAGCA AGTAA
|
|---|
| Protein sequence | MKQKVVSIGD INVANDLPFV LFGGMNVLES RDLAMRICEH YVTVTQKLGI PYVFKASFDK
ANRSSIHSYR GPGLEEGMKI FQELKQTFGV KIITDVHEPS QAQPVADVVD VIQLPAFLAR
QTDLVEAMAK TGAVINVKKP QFVSPGQMGN IVDKFKEGGN EKVILCDRGA NFGYDNLVVD
MLGFSIMKKV SGNSPVIFDV THALQCRDPF GAASGGRRAQ VAELARAGMA VGLAGLFIEA
HPDPEHAKCD GPSALPLAKL EPFLKQMKAI DDLVKGFEEL DTSK
|
|---|
| |