Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1353 |
Symbol | ychM |
ID | 5586517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1349896 |
End bp | 1351548 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640925049 |
Product | putative sulfate transporter YchM |
Protein accession | YP_001462458 |
Protein GI | 157158365 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000101083 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTCC GCGCTCTGAT CGACGCTTGC TGGAAAGAAA AATATACTGC CGCACGGTTT ACCCGTGACC TGATTGCCGG GATAACCGTC GGGATTATTG CTATCCCGCT GGCGATGGCG TTGGCTATTG GTAGTGGTGT GGCACCCCAG TACGGTTTAT ATACCGCAGC TGTTGCGGGG ATTGTCATTG CTCTGACGGG TGGGTCACGC TTTAGCGTTT CCGGTCCGAC TGCGGCATTT GTGGTAATTC TCTATCCCGT GTCGCAACAG TTTGGACTGG CAGGACTGCT GGTTGCGACC TTGCTGTCGG GGATTTTTTT GATTCTGATG GGTCTGGCAC GCTTTGGTCG CCTGATTGAG TATATTCCGG TTTCCGTCAC CTTAGGTTTC ACCTCGGGTA TCGGGATCAC CATCGGTACC ATGCAGATTA AAGATTTTCT CGGTCTGCAA ATGGCCCATG TCCCGGAACA TTATCTACAA AAAGTCGGCG CATTATTTAT GGCGCTGCCG ACCATTAATG TGGGTGATGC TGCCATTGGC ATTGTGACGC TAGGTATTCT TGTTTTCTGG CCGCGTCTGG GCATTCGTTT ACCCGGTCAC CTTCCGGCCT TGCTGGCTGG TTGCGCGGTG ATGGGGATTG TTAACCTGCT CGGCGGACAT GTTGCTACCA TCGGTTCGCA ATTCCACTAC GTCCTGGCCG ATGGTTCTCA GGGTAACGGT ATTCCGCAAC TGCTGCCGCA ACTGGTGCTG CCGTGGGATC TGCCTAATTC AGAATTCACG CTAACCTGGG ATTCTATTCG CACACTGCTG CCTGCGGCAT TCTCAATGGC AATGCTCGGC GCAATCGAAT CTCTGCTCTG CGCCGTGGTG CTGGATGGTA TGACCGGGAC GAAACACAAG GCGAATAGCG AACTGGTTGG ACAGGGACTG GGGAATATCA TCGCTCCGTT CTTTGGTGGC ATTACCGCTA CAGCTGCCAT CGCGCGTTCT GCCGCTAACG TCCGTGCCGG GGCAACTTCC CCTATCTCGG CGGTGATCCA CTCTATTCTG GTTATTCTTG CCCTGCTGGT ACTGGCACCG CTGCTCTCCT GGCTGCCGCT TTCCGCCATG GCTGCCCTGC TGTTGATGGT GGCGTGGAAC ATGAGTGAAG CGCACAAAGT GGTCGACTTG CTGCGTCATG CGCCGAAAGA TGACATCATT GTCATGCTGC TGTGCATGTC GCTGACCGTG CTGTTTGATA TGGTTATTGC CATCAGCGTG GGGATCGTGC TGGCATCGCT GCTGTTTATG CGTCGTATCG CACGTATGAC TCGCCTGGCA CCGGTAGTCG TAGATGTTCC AGACGATGTC CTGGTTCTGC GCGTTATTGG CCCGCTGTTT TTTGCTGCTG CTGAAGGCTT GTTCACGGAC CTGGAGTCAC GTCTTGAAGG CAAACGGATT GTGATTCTGA AGTGGGATGC GGTTCCGGTA CTTGATGCTG GTGGTCTTGA TGCGTTCCAG CGTTTTGTGA AGCGTCTGCC CGAGGGATGT GAACTGCGCG TGTGCAACGT GGAATTCCAG CCACTGCGCA CTATGGCTCG CGCTGGCATT CAACCGATCC CGGGACGCCT GGCGTTCTTC CCGAATCGTC GCGCGGCGAT GGCGGATTTA TAA
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Protein sequence | MPFRALIDAC WKEKYTAARF TRDLIAGITV GIIAIPLAMA LAIGSGVAPQ YGLYTAAVAG IVIALTGGSR FSVSGPTAAF VVILYPVSQQ FGLAGLLVAT LLSGIFLILM GLARFGRLIE YIPVSVTLGF TSGIGITIGT MQIKDFLGLQ MAHVPEHYLQ KVGALFMALP TINVGDAAIG IVTLGILVFW PRLGIRLPGH LPALLAGCAV MGIVNLLGGH VATIGSQFHY VLADGSQGNG IPQLLPQLVL PWDLPNSEFT LTWDSIRTLL PAAFSMAMLG AIESLLCAVV LDGMTGTKHK ANSELVGQGL GNIIAPFFGG ITATAAIARS AANVRAGATS PISAVIHSIL VILALLVLAP LLSWLPLSAM AALLLMVAWN MSEAHKVVDL LRHAPKDDII VMLLCMSLTV LFDMVIAISV GIVLASLLFM RRIARMTRLA PVVVDVPDDV LVLRVIGPLF FAAAEGLFTD LESRLEGKRI VILKWDAVPV LDAGGLDAFQ RFVKRLPEGC ELRVCNVEFQ PLRTMARAGI QPIPGRLAFF PNRRAAMADL
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